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This data release includes physical and chemical characteristics of field collected sediment and soil samples in Missouri representing potential sediment/soil that may enter the water column during construction related activities. Three samples were collected, including Spring River sediment, Osage River bank soil and Columbia crushed limestone. The impacts of increased suspended solid level due to the three samples on early-stage freshwater mussels were examined using three freshwater mussel species, including Fatmucket (Lampsilis siliquoidea), Arkansas Brokenray (Lampsilis reeveiana), and Washboard (Megalonaias nervosa). Specifically, toxicity endpoints including survival, biomass, and growth of juveniles were...
Categories: Data;
Tags: Acute toxicity,
Aquatic Biology,
Boone County,
Chronic toxicity,
Osage River,
This dataset provides results for the following: (1) metals concentrations in soils surrounding breeding song bird nest sites; (2) metals concentrations in invertebrates (earthworm and grub composites) collected near nest sites; (3) metals concentrations and delta-aminolevulinic acid dehydratase (ALAD) activity in avian blood samples; and (4) metals concentrations, indicators of oxidative stress and DNA damage, and histopathology in liver and/or kidney tissues collected from breeding song birds.
This dataset documents locations of and water temperature recorded by Hobo Water Temp Pro series loggers (Onset Computer Corp., Bourne, MA) deployed by the USGS Comprehensive Sturgeon Research Project at up to 24 locations in the Lower Missouri River (from the Gavins Point Dam near Yankton, South Dakota to its confluence with the Mississippi River near St. Louis, Missouri) and 13 selected tributaries (James River, Big Sioux River, Little Sioux River, Platte River (in Nebraska), Nishnabotna River, Nodaway River, Platte River (in Missouri), Kansas River, Grand River, Chariton River, Lamine River, Osage River, and Gasconade River) since 2005. Data document the site name, spatial location, temporal extent of water temperature...
This data set includes geospatial data and tables providing location, environmental, and vegetation data collected in 2017 and 2018 at the Little Saint Francis River (LSFR) chat pile restoration site, Fredericktown, Madison County, Missouri. Restoration actions are being implemeneted as part of the settlement for the Madison County Mines Superfund site to compensate the public for losses of natural resources and the services they provide as part of the Natural Resource Damage Assessment and Restoration Southeast Missouri Lead Mining District case. Data were collected prior to and during the early stages of restoration actions to restore bottomland forest habitat, reduce invasive plant species abundance, and improve...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Fredericktown,
Little Saint Francis River,
Madison County,
Madison County Mines Superfund Site,
Missouri,
This data release contains bioassay data from sediment toxicity tests conducted by the USGS Columbia Environmental Research Center (CERC) with 66 sediment samples collected from in and around the Upper Columbia River in the fall of 2013. Toxicity testing was conducted from fall 2013 through summer 2014 with the amphipod, Hyalella azteca, the midge Chironomus dilutus, and the mussel Lampsilis siliquoidea. Short-term toxicity endpoints (10-28 d) included survival, weight, and biomass of all test organisms. Long-term tests with amphipods (42 d) and midges (about 50 d) included reproduction endpoint. These data are intended to be used to characterize concentration-response relationships between metals concentrations...
Categories: Data;
Types: Citation;
Tags: Columbia Environmental Research Center,
Sediment toxicity,
State of Washington,
Upper Columbia River,
Washington Water Science Center,
Interest in the field of environmental DNA (eDNA) is growing rapidly and eDNA surveys are becoming an important consideration for aquatic resource managers dealing with invasive species. However, in order for eDNA monitoring to mature as a research and management tool, there are several critical knowledge gaps that must be filled. One such gap is the fate of eDNA materials in the aquatic environment. Understanding the environmental factors that influence the decay of eDNA and how these factors impact detection probabilities over time and space could have significant implications for eDNA survey design and data interpretation. Here we experimentally explore eDNA decay in waste materials and reproductive cells obtained...
Categories: Data;
Types: Citation;
Tags: Aquatic Biology,
Ecology,
Environmental Health,
Genetics,
Missouri,
Semi-Permeable Membrane Devices (SPMDs) were deployed for approximately 2 weeks at Palmyra Atoll during October and November, 2008. SPMDs passively accumulate organic compounds from the aquatic enviroment, and are then analyzed for various organic compounds. The deployment date, reasons for selecting the particular site, and photograph numbers as links are indicated.
Categories: Data;
Types: Citation,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Pacific Ocean,
Palmyra Atoll,
U.S. Navy,
World War II,
contamination,
Data set contains depth and velocity grids centerpoints generated from hydrodynamic model (SRH-2D) simulations run for a range of discharges. Date range corresponds to month(s) that bathymetric survey was performed. Three study reaches were considered in this analysis: the Fairview reach of the Yellowstone River, MT, the Miami and Lisbon-Jameson reaches of the Lower Missouir River. Data and application are described in detail in accompanying journal article (Erwin et al., 2017).
Categories: Data;
Types: Citation;
Tags: Missouri River, Missouri, Missouri River Basin,
biota,
hydrology,
inlandWaters
These data are comprised of measurements of gross alpha activity, gross beta activity, and radionuclide activities (isotopic U, isotopic Th, Ra-226) in small rodent bodies. Samples were collected at non-mining and U breccia pipe mining sites in various production stages, in the Grand Canyon watershed.
Globally, changing fire regimes due to climate is one of the greatest threats to ecosystems and society. This dataset presents projections of historic and future fire probability for the southcentral U.S. using downscaled climate projections and the Physical Chemistry Fire Frequency Model (PC2FM, Guyette et al., 2012). Climate data from 1900-1929 and projected climate data for 2040-2069 and 2070-2099 were used as model inputs to the Physical Chemistry Fire Frequency Model (Guyette et al. 2012) to estimate fire probability. Baseline and future time period data are from three global climate models (GCMs): CGCM, GFDL, and HadCM3. The nine associated data sets (tiffs) represent estimated change in mean fire probability...
These data are comprised of histopathological analysis of liver and kidney tissues collected from small rodents collected in close proximity to brecchia pipe uranium mines in the Grand Canyon watershed.
These data are comprised of measurements of elements (e.g., uranium, cobalt, nickel, copper, zinc, cadmium, lead, etc.) in Canyon Mine containment pond invertebrate samples collected in calendar years 2017 and 2018.
Data collected from a comprehensive set of hydrodynamic experiments conducted with live grass carp eggs and larvae, to evaluate drifting and swimming patterns with 3 different in-stream obstructions: (1) a gravel bump, (2) a single cylinder, and (3) submerged vegetation. The hydrodynamic behavior of eggs and larvae with each obstruction was continuously monitored for about 85 consecutive hours. Transient spatial distributions of the locations of eggs and larvae across the water column were generated for each flow scenario.
Data from metabarcoding assays to detect a suite of mussel species using mitochondrial DNA regions of the cytochrome c oxidase subunit I (COI) and NADH dehydrogenase subunit (ND1) genes sequences.
These data are comprised of measurements of elements (e.g., uranium, cobalt, nickel, copper, zinc, cadmium, lead, etc.), major anions (chloride, nitrite+nitrate as nitrogen, sulfate, etc.), dissolved organic carbon, and general water quality characteristics in Canyon Mine containment pond water samples collected in calendar year 2019.
This data set includes a point cloud, digital surface model (DSM), and orthoimagery of the Fighter Strips at Palmyra Atoll, USA. Products were generated from aerial images collected in October 2016 using Unoccupied Aerial Systems (UAS, or "drones") with a Ricoh GRII digital camera. Imagery was processed using structure-from-motion photogrammetry that generates a three dimensional point cloud (.las) by identifying pixels from multiple images representing the same object and calculating the x, y, and z coordinates of that object/pixel. Point cloud data were processed to create a 6.3 cm resolution DSM (.tif) of the uppermost reflective surface (i.e., data have not been filtered for vegetation classes or height). Finally,...
Data describe a designed environmental DNA (eDNA) survey for the detection of longnose darter (Percina nasuta) in field collected water samples. Parameters described include the limit of detection and limit of quantification of the assay; a list of freshwater fish species tissue samples that were used to test specificity of the assay; and field collected water samples that were tested to detect the presence of longnose darter DNA. Samples were collected from sites on the St. Francis river, Missouri in 2018.
Data consist of genotypes for pallid sturgeon and paddlefish broodstock and artificially-produced larvae at 19 sturgeon microsatellite loci and four paddlefish loci. Microsatellite genotypes allowed confirmation of homozygous sturgeon DNA and absence of paddlefish DNA in haploid gynogens. Data also consist of DNA yield estimates for haploid gynogens for proof of concept that haploid gynogens can provide sufficient DNA quantity for restriction site-associated DNA sequencing studies.
Text files containing data regarding attributes of lake trout egg thiamine concentrations from sites in lakes Huron and Michigan collected during 2019-20, sampling site locations and quality assurance quality control values for comparison to previous years (2017-18) lake trout egg thiamine concentrations.
Diploid and triploid Grass Carp (Ctenopharyngodon Idella) tagged with acoustic transmitters were observed in Truman Reservoir, Missouri from February 2017 to March 2019 to determine habitat usage in winter. Habitat parameters were measured at used and available sites to model habitat preference. In addition, tagged fish were targeted during removal attempts to determine the efficacy of using tagged Judas Grass Carp in removing wild conspecifics. This dataset includes information on tagged Grass Carp and habitats they selected as well as capture events and characteristics of the wild fish caught during these attempts.
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