Filters: Categories: Data (X) > partyWithName: Dana M Infante (X) > partyWithName: Michigan State University, Department of Fisheries and Wildlife (X)
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This USGS data release documents species distribution models for 271 fluvial fish species in their native ranges of the conterminous United States. Source data, supporting code and model results are documented in this data package. Boosted Regression Tree (BRT) models were used to develop presence/absence predictions for each of the National Hydrography Dataset Plus Version 2.1 stream segments within a species' native range. The predictions provided can be linked to the NHDPlusV2.1 geospatial dataset through the COMID to create a spatial depiction of the models. The primary results are stored in the file "BRT Predictions" and are provided in comma separated value (CSV) and Parquet file formats. Parquet file format...
Categories: Data;
Tags: USGS Science Data Catalog (SDC),
United States of America,
aquatic biology,
biogeography,
biota,
This shapefile contains fish habitat condition index (HCI) scores as well as specific disturbance indices for 6th level Hydrologic Unit Code (HUC12) watersheds of the Watershed Boundary Dataset. The source datasets compiled and attributed to spatial units were identified as being: (1) meaningful for assessing fluvial fish habitat; (2) consistent across the entire study area in the way that they were assembled; (3) broadly representative of conditions in the past 10 years, and (4) of sufficient spatial resolution that they could be used to make valid comparisons among HUC12 units. In this data set, variable summaries are linked to HUC12 watersheds developed for the Watershed Boundary Dataset downloaded on March 18,...
Categories: Data;
Types: ArcGIS REST Map Service,
Map Service;
Tags: 2015 National Assessment,
2015 National Assessment,
DataProduct,
Direct habitat alteration,
Environmental condition,
This USGS data release contains products that resulted from aquatic species distribution modeling in the United States on the National Hydrography Dataset Plus Version 2.1. Source data, supporting code and model results are documented in this data release. The file species_model_list.csv provides a list of most recent models for each combination of species, habitat, and region.
Categories: Data;
Tags: Aquatic Biology,
USGS Science Data Catalog (SDC),
aquatic biology,
biogeography,
fish,
This USGS data release documents coarse ranges for 123 fish species in the conterminous United States for level 8 hydrologic units from the Watershed Boundary Dataset (WBD). These range maps were derived by combining known fish occurrence information from four data sources: point occurrences from the Aquatic Gap Analysis Project (AGAP) fish database, point occurrences from the IchthyMaps dataset, point occurrences from the Global Biodiversity Information Facility (GBIF), and HUC-8 level range maps developed by NatureServe. Data can be linked to geospatial units of the WBD using the HUC8 field. Data are provided in comma separated value (CSV) and zipped Parquet file formats. Parquet file format is provided to help...
Categories: Data;
Tags: USGS Science Data Catalog (SDC),
United States of America,
aquatic biology,
biogeography,
biota,
This shapefile contains cumulative fish habitat condition index (HCI) scores as well as specific disturbance indices for local and network catchments of Southeast Alaska. Catchments were created in support of Jared Ross's Master’s thesis. The source datasets compiled and attributed to spatial units were identified as being: (1) meaningful for assessing fluvial fish habitat; (2) consistent across the entire study area in the way that they were assembled; (3) broadly representative of conditions in the past 10 years, and (4) of sufficient spatial resolution that they could be used to make valid comparisons among local catchment units. Citations: Ross, J.A. Influences of timber management and natural landscape factors...
Categories: Data;
Types: ArcGIS REST Map Service,
Citation,
Map Service;
Tags: 2015 National Assessment,
2015 National Assessment,
DataProduct,
Direct habitat alteration,
Environmental condition,
This CSV file contains cumulative fish habitat condition index (HCI) scores generated for river reaches of the conterminous United States as well as indices generated specifically for four spatial units including local and network catchments and 90 m local and network buffers of river reaches. Note that the cumulative HCI score is determined from limiting index scores generated for the four spatial units listed above. Detailed methods for calculating cumulative fish habitat condition index scores as well as the indices for each spatial extent can be found on the following website: http://assessment.fishhabitat.org/: The variables used to create indices in catchments vs. buffers differ due to differences in resolution...
Categories: Data;
Types: ArcGIS REST Map Service,
Map Service;
Tags: 2015 National Assessment,
2015 National Assessment,
Alabama,
Anthropogenic factors,
Aquatic habitats,
This CSV file contains 21 dam metrics representing stream fragmentation and flow alteration for nearly 2.3 million stream reaches in the conterminous USA. Dam metrics fall into four main categories: segment-based, count and density, distance-based, and cumulative reservoir storage (described below). These data were developed using spatially verified large dam locations (n=49,468) primarily from the National Anthropogenic Barrier Dataset (NABD) that were spatially linked to the National Hydrography Dataset Plus version 1 (NHDPlusV1). These dam metrics have been summarized using the unique identifier field native to the NHDPlusV1 (COMID) which can be used to join this table to spatial layers and data tables of the...
Categories: Data;
Types: Citation;
Tags: 2015 National Assessment,
2015 National Assessment,
2015 National Assessment,
Alabama,
Arizona,
This CSV file contains landscape factors representing anthropogenic disturbances to stream habitats summarized within 6th level Hydrologic Unit Code (HUC12) watersheds of the Watershed Boundary Dataset. The source datasets compiled and attributed to spatial units were identified as being: (1) meaningful for assessing fluvial fish habitat; (2) consistent across the entire study area in the way that they were assembled; (3) broadly representative of conditions in the past 10 years, and (4) of sufficient spatial resolution that they could be used to make valid comparisons among local catchment units. Variables summarized at the HUC12 scale include measures of anthropogenic land uses, population density, roads, dams,...
Categories: Data;
Types: ArcGIS REST Map Service,
ArcGIS Service Definition,
Downloadable,
Map Service;
Tags: 2015 National Assessment,
2015 National Assessment,
Alaska,
Anthropogenic factors,
DataProduct,
This CSV file contains landscape factors representing anthropogenic disturbances to stream habitats summarized within local and network stream catchments as well as 90 m local and network buffer of stream reaches throughout the conterminous U.S. The source datasets compiled and attributed to spatial units were identified as being: (1) meaningful for assessing fluvial fish habitat; (2) consistent across the entire study area in the way that they were assembled; (3) broadly representative of conditions in the past 10 years, and (4) of sufficient spatial resolution that they could be used to make valid comparisons among local catchment units. Variables summarized at the catchment scale include measures of anthropogenic...
Categories: Data;
Types: Citation;
Tags: Alabama,
Anthropogenic factors,
Arizona,
Arkansas,
California,
This geodatabase contains a comparable set of community fish samples from 12 sources, spanning the conterminous United States. The data were compiled through efforts of Michigan State University for the 2010 National Fish Habitat Action Plan (NFHAP) and with support from the U.S. Fish and Wildlife Service (USFWS) and U.S. Geological Survey (USGS) Aquatic GAP Program. All fish sample locations were verified and linked to flowlines of the National Hydrography Dataset Plus Version 1 (NHDPlusV1) using the COMID identifier. Fish records were provided by the following organizations and agencies: USGS, U.S. Environmental Protection Agency (EPA), Connecticut Department of Environmental Protection, Iowa Department of Natural...
Categories: Data;
Types: ArcGIS REST Map Service,
ArcGIS Service Definition,
Downloadable,
Map Service;
Tags: 2010 National Assessment,
2010 National Assessment,
Abundance (organisms),
Alabama,
Arizona,
This shapefile contains cumulative fish habitat condition index (HCI) scores and specific disturbance indices for local and network stream catchments as well as the downstream main channel catchment of perennial and intermittent streams reaches of the five main island of Hawai'i. In this dataset indices are linked to the Hawaii Fish Habitat Partnership (HFHP) stream layer (Tingley et al. in prep) which is a modified version of the 1:24,000 National Hydrography Dataset. It includes 11,436 intermittent and perennial stream reaches across the five main Hawaiian Islands (Hawai’i, Maui, Moloka’i, O’ahu, Kaua’i). Catchment attributes are available for both local catchments (defined as the land area draining directly to...
Categories: Data;
Types: ArcGIS REST Map Service,
Citation,
Map Service;
Tags: 2015 National Assessment,
2015 National Assessment,
Anthropogenic factors,
DataProduct,
Direct habitat alteration,
This CSV file contains landscape factors representing anthropogenic disturbances to stream habitats summarized within local and network stream catchments of Southeast Alaska. The source datasets compiled and attributed to spatial units were identified as being: (1) meaningful for assessing fluvial fish habitat; (2) consistent across the entire study area in the way that they were assembled; (3) broadly representative of conditions in the past 10 years, and (4) of sufficient spatial resolution that they could be used to make valid comparisons among local catchment units. Variables summarized at the catchment scale include measures of anthropogenic land uses, population density, roads, dams, mines, culverts, 303d...
Categories: Data,
Data Release - Revised;
Tags: 2015 National Assessment,
2015 National Assessment,
Alaska,
Anthropogenic factors,
DataProduct,
This USGS data release includes a comma separated value (CSV) file that contains 19 reach-based dam metrics representing stream fragmentation and flow alteration for nearly 2.3 million stream reaches in the conterminous United States. Dam metrics fall into three main categories: count and density, distance-based, and cumulative reservoir storage (described below). These data were developed using spatially verified large dam locations (n=49,140) primarily from the National Anthropogenic Barrier Dataset (NABD) 2012 that were spatially linked to the National Hydrography Dataset Plus version 2.1 (NHDPlusV2.1). These dam metrics have been summarized using the unique identifier field native to the NHDPlusV2.1 (COMID)...
This CSV file contains landscape factors representing anthropogenic disturbances to stream habitats summarized within local and network stream catchments as well as the downstream main channel catchment perennial and intermittent stream reaches of the five main islands of Hawai'i. The source datasets compiled and attributed to spatial units were identified as being: (1) meaningful for assessing fluvial fish habitat; (2) consistent across the entire study area in the way that they were assembled; (3) broadly representative of conditions in the past 10 years, and (4) of sufficient spatial resolution that they could be used to make valid comparisons among local catchment units. Variables summarized at the catchment...
Categories: Data;
Tags: 2015 National Assessment,
2015 National Assessment,
Anthropogenic factors,
DataProduct,
Environmental condition,
This USGS data release documents presence and absences of 271 fish species in the conterminous United States for 35,918 stream reaches of the National Hydrography Dataset Plus Version2.1 (NHDPlusV2.1). Sample dates for this dataset span 1990-2019. Fish samples were aligned to the Integrated Taxonomic Information System (ITIS), where each species record was assigned a Taxonomic Serial Number (TSN). The dataset is structured with records representing a stream reach (i.e. comid), sample description (i.e. source, date) and a series of 271 columns representing species where each species column is named as the TSN. Data can be visualized on the NHDPlusV2.1 after a tabular join using the field 'comid' or can be projected...
Categories: Data;
Tags: United States of America,
aquatic biology,
biogeography,
biota,
environment,
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