Filters: partyWithName: Susan E De La Cruz (X)
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These data describe the results of virus isolation from oropharyngeal/cloacal swabs and testing of sera by a commercial blocking enzyme-linked immunosorbent assay (bELISA) and hemagglutinin (HA) specific testing by microneutralization (MN) and hemagglutination inhibition (HI) for Lesser Scaup in both the Atlantic and Pacific Flyways and Greater Scaup in the Pacific Flyway. These data support a USGS published manuscript.
Categories: Data;
Tags: Atlantic Flyway,
Pacific Flyway,
USGS Science Data Catalog (SDC),
avian influenza,
biota
The Nisqually River Delta represents the largest wetland restoration in the Pacific Northwest. The restoration resulted in a 50% increase in potential salt marsh habitat. The Delta supports threatened salmon fisheries, large populations of migratory birds, and provides unique opportunities for recreation. The Delta also provides multiple ecosystem services, which are the benefits that wildlife or ecosystems provide to people. Development and changing climate patterns threaten to alter the Delta and the ecosystem services it provides. This study aims to quantify the value of existing and potential future ecosystem services from the Delta and provide insight into the vulnerability of the mosaic of habitats that support...
Categories: Project;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: 2020,
Birds,
Birds,
CASC,
Completed,
In response to the rapidly evolving conditions at the Salton Sea with the emergence of both newly formed wetland habitat and increasing hazards to wildlife, the U.S. Bureau of Reclamation and U.S. Geological Survey have funded a re-evaluation of data gaps regarding selenium concentrations in biota the region. As part of this work, selenium concentrations in biological tissue samples were compiled from published reports, public databases, and unpublished archives into a tabulated spreadsheet. Since the California Department of Water Resources summarized selenium biological data in 2005, our compilation efforts focused on the 2005 through 2020 range. The resulting dataset encompasses all records available to us from...
Categories: Data;
Tags: California,
Salton Sea,
USGS Science Data Catalog (SDC),
Wildlife Biology,
bioaccumulation,
This data provides county level occurrence information for all individuals used in modelling potential exposure and spread of highly pathogenic avian influenza (HPAIv) from the 2021-2022 North American outbreak. The data set contains individual identifiers and taxa information, an indicator of exposure, exposure status (Susceptible, Exposed by HPAIv detection in the county, or Exposed by secondary contact with an exposed bird), and date of first occurrence of each individual bird and that bird's exposure status within each visited county. Herein, county refers to any county, parish, borough, census area, or geographic region identified in the associated geospatial data US_CAN_AI.shp (ESRI shapefile format). Occurrence...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Canada,
Ecology,
Remote Sensing,
USGS Science Data Catalog (SDC),
United States,
SET-MH were installed in 2009 and 2010 with three replicates in Reference and Phase II and with two replicates (north-south) pairs in the 2009 restoration area (Units 1-4). SET-MH were read repeatedly at regular, at least annual intervals. Reading SETs consisted of measurements for nine pins facing the four cardinal directions for a total of 36 measurements per SET, per sampling event. Marker Horizons consisted of a marker, usually white feldspar clay, so that the sediment that accumulated on top of the marker would be visible and measurable to the nearest millimeter. Together, SET-MH provide information on surface elevation changes due to surface accretion (MH) compared to changes that may be due to subsurface...
Surface Elevation Tables (SETs) were installed in 2009 and 2010 using permanent, deep rods driven down into the soil with a demolition hammer, typically about 60-80 feet. The top of the rod lies near the sediment surface, with a receiver end. A Surface Elevation Table is a portable mechanical leveling device that attaches to the receiving end at the top of the deep rod. The SET arm includes a bubble level and a notched collar that allows for the arm to be aligned precisely and repeatedly in the cardinal directions. SETs were installed as triplicates in Reference, Phase II, and as north-south pairs in the 2009 restoration area (Units 1-4). Each SET location was read repeatedly at regular, at least annual intervals....
In California, the near-shore area where the ocean meets the land is a highly productive yet sensitive region that supports a wealth of wildlife, including several native bird species. These saltmarshes, mudflats, and shallow bays are not only critical for wildlife, but they also provide economic and recreational benefits to local communities. Today, sea-level rise, more frequent and stronger storms, saltwater intrusion, and warming water temperatures are among the threats that are altering these important habitats. To support future planning and conservation of California’s near-shore habitats, researchers examined current weather patterns, elevations, tides, and sediments at these sites to see how they affect...
Categories: Project;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: 2012,
Bolinas Lagoon,
CA,
CASC,
California,
This datasets summarizes small mammal trapping efforts that USGS San Francisco Bay Estuary Field Station has led, co-led, or supervised, to detect and monitor the endangered salt marsh harvest mouse (Reithrodontomys raviventris) in the northern reaches of San Francisco Bay from 1998-2014. As the salt marsh harvest mouse is listed as endangered under the Endangered Species Act, sensitive location information can be made available upon request by contacting the dataset point of contact. These data support the following publication: Marcot, B.G., Woo, I., Thorne, K.M., Freeman, C.M., and Guntenspergen, G.R., 2020. Habitat of the endangered salt marsh harvest mouse (Reithrodontomys raviventris) in San Francisco Bay....
Categories: Data;
Tags: San Francisco Bay,
San Pablo Bay,
USGS Science Data Catalog (SDC),
Wildlife Biology,
biota,
Remote sensing based maps of tidal marshes, both of their extents and carbon stocks, have the potential to play a key role in conducting greenhouse gas inventories and implementing climate mitigation policies. Our objective was to generate a single remote sensing model of tidal marsh aboveground biomass and carbon that represents nationally diverse tidal marshes within the conterminous United States (CONUS). To meet this objective we developed the first national-scale dataset of aboveground tidal marsh biomass, species composition, and aboveground plant carbon content (%C) from six CONUS regions: Cape Cod, MA, Chesapeake Bay, MD, Everglades, FL, Mississippi Delta, LA, San Francisco Bay, CA, and Puget Sound, WA....
Categories: Data,
Data Release - Revised;
Tags: C-band synthetic aperture radar,
Cape Cod,
Carbon sequestration,
Chesapeake Bay,
Everglades National Park,
Habitat biogeochemistry was assessed by measuring 31 variables in sediments, porewater, and surface waters related to mercury content, organic matter, sediment characteristics, and microbial rates of sulfate reduction, iron reduction, and methanogenesis. Fifty-six composite surface (0-2 cm) sediment cores and 32 surface water samples were collected in three wetlands in the spring and summer of 2005 and 2006.
Methylmercury (MeHg) is a globally pervasive contaminant that biomagnifies in food webs and can reach toxic concentrations in consumers at higher trophic levels, including wildlife and humans. The production of MeHg, and its subsequent entry and biomagnification in food webs, is governed by a complex suite of biogeochemical, physical, and ecological processes, resulting in spatial variation in the distribution of MeHg. To better understand the link between MeHg production in sediments and MeHg bioaccumulation in biota, we evaluated the effects of habitat biogeochemistry, food web structure, and diet composition on bioaccumulation in the wetland-obligate California black rail (Laterallus jamaicensis coturniculus)...
This dataset provides vegetation data associated with terrestrial fallout invertebrate traps.
Diet composition can be influenced by age- and sex-related factors including an individual’s morphology, social status, and acquired skills; however, specialization may only be necessary when competition is intensified by high population densities or increased energetic demands. The western sandpiper is a small (22-35 grams) migratory shorebird that exhibits female-biased sexual size dimorphism with a 5 percent greater body size and a 15 percent longer bill in females compared to males. It is considered a generalist with a diverse diet that includes benthic invertebrates and biofilm – a thin layer of microphytobenthos, bacteria, and detritus encased in a polysaccharide-rich matrix of extracellular polymeric substances...
Categories: Data;
Tags: San Francisco Bay,
USGS Science Data Catalog (SDC),
Wildlife Biology,
ecology,
food web,
This dataset consists of carbon, nitrogen, and sulfur stable isotope data from primary producers, invertebrates, and fish from the Nisqually River Delta, Washington from 2011, 2012, and 2015. Data were collected to determine food web structure in different habitat zones within the entire river delta. Data collection for primary producers and invertebrates were led by U.S. Geological Survey, while all fish capture studies were led by the Nisqually Indian Tribe. These data support the following publication: Davis, M.J., Woo, I., De La Cruz, S.E.W., Ellings, C.S., Hodgson, S., and Nakai, G., 2024. Allochthonous marsh subsidies enhances food web productivity in an estuary and its surrounding ecosystem mosaic. PLOS...
Categories: Data;
Tags: Ecology,
Nisqually Indian Reservation,
Nisqually National Wildlife Refuge,
USGS Science Data Catalog (SDC),
biota,
This dataset provides terrestrial, aquatic, and benthic macroinvertebrate data at four sites within Willapa National Wildlife Refuge.
Methylmercury concentrations and stable isotope ratios were measured from back feathers of California black rails (Laterallus jamaicensis coturniculus) and six taxa of their invertebrate prey (Amphipoda, Arachnida, Coleoptera, Diptera, Gastropoda, and Hemiptera). Samples were collected from three wetlands in the spring and summer of 2005 and 2006.
These data, which support a USGS authored manuscript, describe how active and previous previous infection with avian influenza impacts the movement ecology of several wild waterfowl species that overwinter in California. Results varied by species and demonstrate that the relationships between avian influenza infection and wild bird movements are context- and species-dependent.
Categories: Data;
Tags: California,
Pacific Flyway,
USGS Science Data Catalog (SDC),
Wildlife Biology,
Wildlife Disease,
These location data were collected from a free-ranging species of diving duck, the Lesser Scaup (Aythya affinis), using the Argos Satellite Telemetry System with platform transmitter terminals (PTTs) that were surgically implanted in ducks. Ducks were marked at two breeding areas: Yukon Flats National Wildlife Refuge in Alaska, USA at the northern extent of their distribution (66.51000 degrees N, -145.98556 degrees W) in 2012 and at Red Rock Lakes National Wildlife Refuge in Montana, USA at the southern extent of their distribution (44.63778 degrees N, -111.73694 degrees W) in 2009. These data can be downloaded from the Movebank repository (www.movebank.org) as an Excel (.csv), Google Earth (.kmz), or ESRI shapefile...
This research focuses on assessing large scale tidal marsh restoration for the carbon co-benefits of foodweb support and carbon sequestration potential. By assessing wildlife co-benefits with carbon accounting, this project will link traditional objectives of protecting, restoring, and managing diverse wetlands to support habitats and species with carbon dynamics and sequestration. This study addresses interconnected C processes and dynamics including: * Identify carbon sources that support Chinook foodwebs * Compare to the carbon sources that are stored in peat * Determining Net Ecosystem Carbon Balance within in a reference and restored marsh * Evaluate land use and vegetation change over time * Assessing...
Categories: Project;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Carbon flux,
Food web,
Modeling,
Nisqually River Delta,
Staging,
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