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Globally, groundwater dependent ecosystems (GDEs) are increasingly vulnerable to groundwater extraction and land use practices. Groundwater supports these ecosystems by providing inflow, which can maintain water levels, water temperature, and chemistry necessary to sustain the biodiversity that they support. Many aquatic systems receive groundwater as a portion of base flow, and in some systems (e.g., springs, seeps, fens) the connection with groundwater is significant and important to the system’s integrity and persistence. Groundwater management decisions for human use may not consider ecological effects of those actions on GDEs, which rely on groundwater to maintain ecological function. This disconnect between...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Ecology,
Hydrology,
Land Use Change,
New England,
Remote Sensing,
This dataset provides field tagging and recapture information used to examine the movement patterns of Arkansas River Shiner Notropis girardi and Emerald Shiner Notropis atherinoides. Fish were tagged and recaptured from October 2018 to June 2020 over two field seasons. Tagged fish were collected using seine netting at seven locations in the first field season and four locations in the second field season. Once captured, all fish were anesthetized using buffered tricaine methanesulfonate before measuring and tagging. Over the first field season (2018-2019), all fish were tagged with two visible implant elastomer (VIE) tags. Arkansas River Shiner ≥ 50 mm total length were also tagged with a passive integrated transponder...
Grouse: These data on sharp-tailed grouse survival times are provided for individuals wanting to run an age-period survival analysis. Entry and exit times are expressed in integer days from the start of the study. Entry age and exit age expressed in integer days are also included. Data are structured to implement survival analysis. White-tailed Deer: These data on white-tailed deer survival times are provided for individuals wanting to run an age-period survival analysis. Entry and exit times are expressed in integer weeks from the start of the study. Entry age and exit age expressed in integer weeks are also included. Data are structured to implement survival analysis. Only adult female individuals that were chronic-wasting...
Categories: Data;
Tags: USGS Science Data Catalog (SDC),
Wildlife Biology,
Wisconsin,
utilitiesCommunication
Data used to test a video monitoring and computational system for estimating juvenile fish abundance
We developed and tested neural network-based models to recognize and count emigrating juvenile river herring in continuous video. Continuous video was collected from an underwater camera installed at Great Herring Pond in Bourne, Massachusetts (USA) between June and November 2017. Our algorithm extracts video frames to assess presence/absence of fish and count numbers of fish emigrating. We used extracted video frames to assess model performance. Provided datasets include information about extracted frames that were used for model assessment. This data release includes four datasets that were used to test model performance and select the best fitting model. (1) The “Model Evaluation Dataset” includes count and presence/absence...
Categories: Data;
Tags: Ecology,
New England, Massachusetts, Cape Cod,
USGS Science Data Catalog (SDC),
biota
The data contained in child items of this page were developed to support the Species Status Assessments conducted by the U.S. Fish & Wildlife Service and conservation planning for State, Federal, and non-government researchers, managers, landowners, and other partners for five focal herpetofauna species: gopher tortoise (Gopherus polyphemus), southern hognose snake (Heterodon simus), Florida pine snake (Pituophis melanoleucus mugitus), gopher frog (Lithobates capito), and striped newt (Notophthalmus perstriatus). These data were developed by the USGS Cooperative Fish & Wildlife Research Unit at the University of Georgia in collaboration with other partners. The three child items contain the following data: (1)...
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Alabama (AL),
Florida (FL),
Florida Pine Snake,
Georgia (GA),
Gopher Frog,
This dataset consists of three datafiles: 1) vegetation, 2) abiotic factors, and 3) groundwater levels. Vegetation data were collected twice per month between July and September of 2019 and 2020. Data was collected by establishing 1m x 1m subplots within 12 5m-radius sampling plots distributed across the management units of Bitter Lake National Wildlife Refuge. Subplots were established to represent plot-level vegetation structure and facilitate estimates of rare plant relative abundance. The abiotic factors dataset includes observations of surface soil moisture, salinity, groundwater quality data, and rare plant presence taken weekly between March – October 2019 and May – October 2020 at each established plot within...
Dataset containing information for white-tailed deer samples from Ohio, Pennsylvania, Maryland, Virginia and New York, genotyped for 11 microsatellites markers. Marker OvirQ should not be used as it presents alleles inconsistent with reported pattern, with some alleles separated by only 1 base pair and inconsistent between runs. Projected coordinates representing sampling location are in a user-defined CRS, similar to USA Contiguous Albers Equal Area Conic: "+proj=aea +lat_1=29.3 +lat_2=45.3 +lat_0=23 +lon_0=-96 +x_0=0 +y_0=0 +ellps=GRS80 +towgs84=0,0,0,0,0,0,0 +units=m +no_defs".
We applied habitat suitability indices and network analysis to identify the lakes most critical to the establishment and spread of zebra mussels (Dreissena polymorpha). We included 225 lakes in the study area Habitat suitability indices were based on known tolerances of water chemical and physical parameters in relationship to zebra mussel growth, survival, and reproduction. We created multiple boater movement networks consisting of lake nodes and connecting roadway edges. Each network represented the potential connectivity of lakes for recreational users depending on the maximum roadway distance boaters were likely to travel. We evaluated three different maximum roadway distances based on boater movement surveys:...
Digital flood-inundation maps for selected streams in Stark County were created by the U.S. Geological Survey (USGS) in cooperation with the Muskingum Watershed Conservancy District and the Stark County Commissioners as part of a Federal Emergency Management Agency (FEMA) Flood Insurance Study (FIS). The flood-inundation maps show estimates of the areal extent corresponding to the 1% and 0.2% annual-exceedance probability floods. Flood profiles were computed for the stream reach by means of the one-dimensional step-backwater model.
This volume's release consists of 64642 media files captured by autonomous wildlife monitoring devices under the project, Maine Department of Inland Fisheries and Wildlife. The attached files listed below include several CSV files that provide information about the data release. The file, "media.csv" provides the metadata about the media, such as filename and date/time of capture. The actual media files are housed within folders under the volume's "child items" as compressed files. A critical CSV file is "dictionary.csv", which describes each CSV file, including field names, data types, descriptions, and the relationship of each field to fields other CSV files. Some of the media files may have been "tagged" or "annotated"...
The compressed files shown below consist of approximately 63000 out of 281258 total raw media files (photos) associated with the data release entitled SiMPL Wildlife Magnet Project Data Release Volume 1; doi:10.5066/P1VUKJQK.
The dataset associated with this metadata are included in two separate csv files, Trial 1 and Trial 2. Both .cvs files describe cell densities in different cultures measured at 3, 6, and 9 days of time at different glyphosate exposure concentrations.
Categories: Data;
Tags: Ecology,
USGS Science Data Catalog (SDC),
Wildlife Biology,
glyphosate,
harmful algae,
These data are the collection of generalized linear mixed models run for AIC comparison of the pre- and post-White-nose Syndrome bat mist-net captures and percent juveniles in capture by year, time since White-nose Syndrome at collection set, U.S Fish and Wildlife Service designated geographic units, states or NABAT grid cell, collection site mean temperature, collection site temperature range and collection site elevation. Models are inclusive of data from 1999-2019 for the little brown bat (Myotis lucifugus), northern long-eared bat (Myotis septentrionalis) and the tri-colored bat (Perimyotis subflavus).
Categories: Data;
Tags: Ecology,
USGS Science Data Catalog (SDC),
United States,
Wildlife Biology,
Wildlife Disease,
These data are night level totals of bat calls by species and phonic group recorded at Fort Knox, Kentucky during the summer of 2017. Data contain recordings from zero-crossing frequency division and full spectrum receiving units.
Categories: Data;
Tags: Hardin County,
Kentucky,
U.S. Army Garrison Fort Knox,
USGS Science Data Catalog (SDC),
Wildlife Biology,
The three datasets were used in a model estimating the current and future persistence of 222 populations of southern hognose snakes, as estimated as part of the USFWS Species Status Assessment. Because these datasets contain information about sensitive species at risk of overcollection and harassment, they do not contain any spatial identifying information. The "HESIM_locs" dataset contains a list of southern hognose snake occurrence records with associated year of observation and population ID. The "SEsnakes_locs" dataset contains a list of non-target snake species occurrence records with associated year of observation and population ID. The "HESIM_pops_all" dataset contains a list of southern hognose snake populations...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: 3 Rs,
Alabama (AL),
Florida (FL),
Georgia (GA),
Heterodon simus,
Zebra mussels are representative of nonindigenous aquatic species (NAS) with devastating economic, recreational, and environmental impacts that are already under watch as a problematic species across the U.S. and in Texas. Targeting dispersal pathways is likely the most efficient means of controlling their spread further west. The movement of recreational watercraft is one of the main vectors for the spread of zebra mussels and other NAS among lakes. Thus, we created a risk assessment to guide monitoring efforts to detect and report new sightings of zebra mussels and other NAS. Lake risk scores were based on the potential establishment and spread of zebra mussels. Lake establishment risk was determined by applying...
This .zip file contains five products that will allow users to recreate the analyses and spatial data figures used in Sergeant et al. 2023, Hypoxia Vulnerability in the Salmon Watersheds of Southeast Alaska: 1) Hypoxia vulnerability calculations (.csv file) at water temperature monitoring sites, 2) Hypoxia vulnerability calculations (.csv file) for stream reaches near hatchery release sites, 3) Habitat characteristics (.csv file) at water temperature monitoring sites, 4) R code (.R file) for recreating Figure 3, modeled contours of the estimated number of pink salmon/m2 to create hypoxia in Southeast Alaska streams across all potential combinations of velocity, depth, and water temperature, 5) Esri map package (.mpk...
Chronic wasting disease (CWD) is a transmissible spongiform encephalopathy that was first detected in captive cervids in Colorado, United States (US) in 1967, but has since spread into free-ranging white-tailed deer (Odocoileus virginianus) populations across the US and Canada. In some areas, the disease is considered endemic in wild deer populations, and governmental wildlife agencies have employed epidemiological models to understand long-term environmental risk. However, continued rapid spread of CWD into new regions of the continent has underscored the need for extension of these models into broader tools applicable for wide use by wildlife agencies. Additionally, efforts to semi-automate models will facilitate...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: USGS Science Data Catalog (SDC),
Wildlife Disease,
biota,
surveillance,
surveillance
This dataset includes XY coordinates and species and behavioral observations of birds detected in aerial imagery captured over coastal islands along Maine's coast during 30 May. - 3 June 2019. The Partenavia P.68 Observer plane flew over 268 islands within the Gulf of Maine (GOM). The plane flew at an altitude of 310 m above ground level and was equipped with a PhaseOne iXU-RS1000 (100 megapixel) multispectral camera and 70 mm lens to capture 4-band (red, green, blue, (RGB) and near-infrared (NIR) light) imagery with a ground sampling distance of 2 cm/px. Timing for the aerial image collection was selected to reflect peak nesting periods for the focal species (Herring Gull, Great Black-backed Gull, Double-crested...
Categories: Data;
Tags: Ecology,
Gulf of Maine/Bay of Fundy,
Maine Coastal,
North Atlantic,
Remote Sensing,
The potential introduction of SARS-CoV-2, the virus responsible for the COVID-19 pandemic, into North American bat populations is of interest to wildlife managers due to recent declines of several species. Populations of little brown bats (Myotis lucifugus) have collapsed due to white-nose syndrome (WNS), a disease caused by the introduction and spread of the fungal pathogen Pseudogymnoascus destructans (Pd). Throughout much of the United States and southern Canada, large colonies of the species routinely established diurnal roosts in anthropogenic structures creating the potential for direct human contact and cross-species disease transmission. Given recent declines and the potential for further disease impacts,...
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