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Shapefile created by USGS. Channel transects were constructed to be used in evaluating channel widths and channel width variation. Transects were laid out at 0.1 mile intervals along the navigation channel thalweg. They extend perpendicular to thalweg and intersect the bankfull channel margin, delineated from low-altitude aerial orthophotos provided by the US Army Corps of Engineers, 11/1/2012 to 11/21/2012. The bankfull dimensions were digitized by hand. Each transect was additionally attributed with the USGS bend number, Pallid Sturgeon Population Assessment Program (PSPAP) segment number, and PSPAP bend number.
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Data set contains individual structures and use-areas identifiable from scanned images of 1944 hand-drawn map of buildings and facilities at Palmyra Atoll during World War II, at which time the atoll served as a training facility for the U.S. Navy. Scanned images were georeferenced against control points identifiable from 2007 QuickBird satellite imagery and on control points for which positional data were gathered during sampling in October and November 2008. Georeferenced image was then used to delineate individual structures and other areas as polygons. Attributes were taken from legend for 1944 map.
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Data set contains depth and velocity grids centerpoints generated from hydrodynamic model (SRH-2D) simulations run for a range of discharges. Date range corresponds to month(s) that bathymetric survey was performed. Three study reaches were considered in this analysis: the Fairview reach of the Yellowstone River, MT, the Miami and Lisbon-Jameson reaches of the Lower Missouir River. Data and application are described in detail in accompanying journal article (Erwin et al., 2017).
The vernal pool fairy shrimp, Branchinecta lynchi, (Branchiopoda; Anostraca) and other fairy shrimp species have been listed as ‘threatened’ or ‘endangered’ under the United States’ Endangered Species Act (ESA). There is little information about the sensitivity of Branchinecta spp. to toxic effects of contaminants, making it difficult to determine whether they are adequately protected by water quality criteria. A series of acute (24 hr) lethality/immobilization tests were conducted with three species of fairy shrimp (Branchinecta lynchi, Branchinecta lindahli, and Thamnocephalus platyurus) and 10 chemicals with varying modes of toxic action: ammonia, potassium, chloride, sulfate, chromium(VI), copper, nickel, zinc,...
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Loricariid catfish of the genus Pterygoplichthys have been introduced in many localities around the world. They are freshwater fishes, but may also use low-salinity habitats such as estuaries for feeding or dispersal. Here we report results of a field survey and salinity-tolerance trials for a population of Pterygoplichthys sp. collected in Kerala, India. In both chronic and acute salinity-tolerance trials, fish were able to withstand salinities up to 12 ppt with no mortality; however, fish transferred to salinities > 12 ppt did not survive. The experimental results provide evidence that non-native Pterygoplichthys sp. are able to tolerate mesohaline conditions for extended periods, and can easily invade the brackish...
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The decline of Taxodium distichum, bald cypress, forests along the Gulf Coast of North America is partly due to elevation loss and subsequent flooding. In many coastal wetlands, a common approach for coastal restoration is to rebuild elevation through the application of dredge spoil, but this technique has not been used widely in coastal forests due to concerns of negatively impacting trees. This experiment explored health responses of Nyssa aquatica, water tupelo, and T. distichum saplings to applications of low salinity dredge spoil in a greenhouse setting. Compared to controls, saplings of T. distichum grown in 7 and 15 cm sediment depths had higher final heights, and stem and total biomass while N. aquatica...
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The data set contains raw data for pesticide (naled) residues on samplers collected after aerial applications over the National Key Deer Refuge in the Florida Keys, and biological response (cholinesterase activity in butterflies and mosquito mortality) for organisms co-located with the residue samplers.
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This portion of the data release presents fish abundance data from samples collected in the Elwha River estuary, Washington, in 2006, 2007, 2013, and 2014 (no associated USGS Field Activities numbers because data were collected predominantly by biologists from the Lower Elwha Klallam Tribe). We used the Puget Sound beach seining protocol (Simenstad and others, 1991) to sample fish populations in the Elwha River estuary complex. The beach seine was 38 m long x 2 m deep, with a 2 m x 2 m bag in the center of the net; mesh size was 3.18 mm, 6.35 mm, and 31.75 mm, for the bag, center panel, and wings, respectively. The seine net was deployed from bank to bank by a small skiff and then pulled on shore. The number of...
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This portion of the data release presents terrestrial invertebrate abundance data from samples collected in emergent and shrub vegetation along the edge of the Elwha River estuary, Washington, in 2007 and 2013 (no associated USGS Field Activities numbers because data were collected predominantly by biologists from the Lower Elwha Klallam Tribe). We deployed terrestrial insect fallout traps at ten locations in the east estuary, five replicates each in shrub and emergent (littoral) vegetation habitats. Clear, rectangular traps (2,400 cm2 in 2007 and 3,526 cm2 in 2013) were filled with 5 cm of filtered soapy water and deployed for 72 hours. Invertebrate counts from 2013 were standardized to the 2007 bin size to account...
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This dataset includes a reference baseline used by the Digital Shoreline Analysis System (DSAS) to calculate rate-of-change statistics for the exposed north coast of Alaska coastal region between the Hulahula River and the Colville River for the time period 1947 to 2010. This baseline layer serves as the starting point for all transects cast by the DSAS application and can be used to establish measurement points used to calculate shoreline-change rates.
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This dataset consists of long-term (~63 years) shoreline change rates for the north coast of Alaska between the Hulahula River and the Colville River. Rate calculations were computed within a GIS using the Digital Shoreline Analysis System (DSAS) version 4.3, an ArcGIS extension developed by the U.S. Geological Survey. Long-term rates of shoreline change were calculated using a linear regression rate-of-change method based on available shoreline data between 1947 and 2010. A reference baseline was used as the originating point for the orthogonal transects cast by the DSAS software. The transects intersect each shoreline establishing measurement points, which are then used to calculate long-term rates.
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This dataset includes a reference baseline used by the Digital Shoreline Analysis System (DSAS) to calculate rate-of-change statistics for the sheltered north coast of Alaska coastal region between the Colville River and Point Barrow for the time period 1947 to 2012. This baseline layer serves as the starting point for all transects cast by the DSAS application and can be used to establish measurement points used to calculate shoreline-change rates.
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Seafloor photographs were collected by SCUBA divers along pre-determined transects using an underwater digital camera following benthic survey protocols developed by the National Park Service (NPS) at Kaloko-Honokohau National Historical Park (Marrack and others, 2014; Weijerman and others, 2014) and modeled after the U.S. Geological Survey (USGS) and NPS coral reef survey protocols (Rogers and others, 2001; Brown and others, 2011). This dataset includes seafloor photographs in jpg format, the locations of which are described in the accompanying comma-separated files. References Cited: Marrack, L., Beavers, S., Weijerman, M., Most, R., 2014, Baseline assessment of the coral reef habitat in Kaloko-Honokōhau National...
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This part of the data release provides the U.S. Geological Survey (USGS), Pacific Coastal and Marine Science Center (PCMSC) 2005 bathymetry data collected in Skagit Bay Washington that is provided as a 1-m resolution TIFF image, as well as a 1-m resolution shaded-relief TIFF image. FGDC metadata is also provided. In 2004, 2005, 2007, and 2010 the USGS, PCMSC collected bathymetry and acoustic backscatter data in Skagit Bay, Washington using an interferometric bathymetric sidescan-sonar system mounded to the USGS R/V Parke Snavely and the USGS R/V Karluk. The research was conducted in coordination with the Swinomish Indian Tribal Community, Skagit River System Cooperative, Skagit Watershed Council, Puget Sound Nearshore...
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This data release presents data for 5-m resolution multibeam-bathymetry and acoustic-backscatter data of the northern Channel Islands region, southern California. In 2004 the U.S. Geological Survey, Pacific Coastal and Marine Science Center collected multibeam-bathymetry and acoustic-backscatter data in the northern Channel Islands region, southern California. The region was mapped aboard the R/V Ewing using a Kongsberg Simrad EM-1002 multibeam echosounder. These data were previously published on-line at http://pubs.usgs.gov/of/2005/1153/. In this data release the data have been reprocessed to a finer spatial resolution (5-m versus 15-m) using more modern processing techniques. Due to the large file sizes the entire...
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This part of the data release presents a digital elevation model (DEM) created from bathymetry data collected on February 1, 2011, in the Sacramento River from the confluence of the Feather River to Knights Landing. The data were collected by the USGS Pacific Coastal and Marine Science Center (PCMSC) team with collaboration and funding from the U.S. Army Corps of Engineers. This project used interferometric sidescan sonar to characterize the riverbed and channel banks along a 12 mile reach of the Sacramento River, California (River Mile 79 through River Mile 91) to aid in the understanding of fish response to the creation of safe habitat associated with levee restoration efforts in two 1.5 mile reaches of the Sacramento...
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Here we present surface current results from a physics-based, 3-dimensional coupled ocean-atmosphere numerical model that was generated to understand coral larval dispersal patterns in Maui Nui, Hawaii, USA. The model was used to simulate coral larval dispersal patterns from a number of existing State-managed reefs and large tracks of reefs with high coral coverage that might be good candidates for marine-protected areas (MPAs) during 8 spawning events during 2010-2013. The goal of this effort is to provide geophysical data to help provide guidance to sustain coral health in Maui Nui, Hawaii, USA. Each model output run is available as a netCDF file with self-contained attribute information. Each file name is appended...
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This dataset includes stream temperatures from two data loggers installed at one site in the Little Blitzen River of SE Oregon as part of a redband trout (Oncorhynchus mykiss gairdnerii) study. The site was used as an undisturbed reference in comparison with similar temperature monitoring sites in the Willow-Whitehorse watershed that experienced a 2012 fire that burned nearly the entire watershed.
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Note: this data release has been deprecated. Please see new data release here: https://doi.org/10.5066/P18WWMVR. Freshwater fish are among the most vulnerable taxa to climate change globally but are generally understudied in tropical island ecosystems. Climate change is predicted to alter the intensity, frequency, and variability of extreme flow events on the Caribbean island of Puerto Rico. These changes may impact Caribbean native and non-native stream ecosystems and biota complex ways. We compiled an extensive dataset of native and non-native fish assemblages collected at 119 sites across Puerto Rico from 2005 to 2015. We coupled these data with stream flow indices and dam height to understand how flow dynamics...
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This data set provides a table of length, weight, sex, and estimated fecundity of Silver Chub Macrhybopsis storeriana in western Lake Erie from 1979 through 1987. These data are potentially useful to those studying recovery and restoration of Silver Chub in Lake Erie. These data were collected as part of routine trawl surveys in western Lake Erie. Other data associated with these data can be found in the Great Lakes Research Vessel Operations 1958-2018. (ver. 3.0, April 2019). A drawn map, originally packaged alongside the hard copy data sheets, is included in this data release. This map guides users in identifying specific locations of capture. Due to the legacy nature of these data, location data is estimated...
map background search result map search result map High-resolution multibeam bathymetry and backscatter data collected in 2004 for the northern Channel Islands region, southern California Physics-based numerical circulation model outputs of ocean surface circulation during the 2010-2013 summer coral-spawning seasons in Maui Nui, Hawaii, USA Cholinesterase inhibition in butterflies on the National Key Deer Refuge following aerial application of a mosquito control pesticide Bathymetric DEM of the Sacramento River, from the Feather River to Knights Landing, California in February 2011 Miami Reach of Lower Missouri River Hydrodynamic Model Outputs Fish abundance in the Elwha River estuary, Washington, from 2006 to 2014 Terrestrial invertebrate abundance in the Elwha River estuary, Washington, in 2007 and 2013. Stream Temperature Data in the Little Blitzen watershed of SE Oregon, 2009-15 Data for sediment application to cypress and tupelo seedlings in greenhouse study - 2016 US Navy roads Palmyra Atoll 1944 Offshore baseline for the exposed Central Beaufort Sea, Alaska coastal region (Hulahula River to the Colville River) generated to calculate shoreline change rates Offshore baseline for the sheltered West Beaufort Sea, Alaska coastal region (Colville River to Point Barrow) generated to calculate shoreline change rates Digital Shoreline Analysis System (DSAS) version 4.3 Transects with Long-Term Linear Regression Rate Calculations for the Exposed Central Beaufort Sea coast of Alaska between the Hulahula River and the Colville River Historical Length, Weight, and Fecundity of Silver Chub (Macrhybopsis storeriana) in Western Lake Erie High-resolution bathymetry data collected in 2005 in Skagit Bay, Washington Bankfull channel transects, Lower Missouri River The Effects of Flow Extremes on Native and Non-Native Stream Fishes in Puerto Rico (Deprecated July 2024) Stream Temperature Data in the Little Blitzen watershed of SE Oregon, 2009-15 Terrestrial invertebrate abundance in the Elwha River estuary, Washington, in 2007 and 2013. Fish abundance in the Elwha River estuary, Washington, from 2006 to 2014 US Navy roads Palmyra Atoll 1944 Miami Reach of Lower Missouri River Hydrodynamic Model Outputs Bathymetric DEM of the Sacramento River, from the Feather River to Knights Landing, California in February 2011 High-resolution bathymetry data collected in 2005 in Skagit Bay, Washington Cholinesterase inhibition in butterflies on the National Key Deer Refuge following aerial application of a mosquito control pesticide Historical Length, Weight, and Fecundity of Silver Chub (Macrhybopsis storeriana) in Western Lake Erie High-resolution multibeam bathymetry and backscatter data collected in 2004 for the northern Channel Islands region, southern California The Effects of Flow Extremes on Native and Non-Native Stream Fishes in Puerto Rico (Deprecated July 2024) Physics-based numerical circulation model outputs of ocean surface circulation during the 2010-2013 summer coral-spawning seasons in Maui Nui, Hawaii, USA Offshore baseline for the sheltered West Beaufort Sea, Alaska coastal region (Colville River to Point Barrow) generated to calculate shoreline change rates Digital Shoreline Analysis System (DSAS) version 4.3 Transects with Long-Term Linear Regression Rate Calculations for the Exposed Central Beaufort Sea coast of Alaska between the Hulahula River and the Colville River Offshore baseline for the exposed Central Beaufort Sea, Alaska coastal region (Hulahula River to the Colville River) generated to calculate shoreline change rates Data for sediment application to cypress and tupelo seedlings in greenhouse study - 2016 Bankfull channel transects, Lower Missouri River