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Folders: ROOT > ScienceBase Catalog > USGS Western Ecological Research Center > Western Ecological Research Center Approved Data Releases ( Show all descendants )

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Lidar-derived digital elevation models often contain a vertical bias due to vegetation. In areas with tidal influence the amount of bias can be ecologically significant, for example, by decreasing the expected inundation frequency. We generated a corrected digital elevation mode (DEM) for tidal marsh areas around San Francisco Bay using the Lidar Elevation Adjustment with NDVI (LEAN) technique (Buffington et al. 2016). Survey-grade GPS survey data (6614 points), NAIP-derived Normalized Difference Vegetation Index, and original 1 m lidar DEM from 2010 were used to generate a model of predicted bias across tidal marsh areas. The predicted bias was then subtracted from the original lidar DEM and merged with the NOAA...
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Lidar-derived digital elevation models often contain a vertical bias due to vegetation. In areas with tidal influence the amount of bias can be ecologically significant, for example, by decreasing the expected inundation frequency. We generated a corrected digital elevation model (DEM) for wetlands throughout Collier county using a modification of the Lidar Elevation Adjustment with NDVI (LEAN) technique (Buffington et al. 2016). GPS survey data (15,223 points), NAIP-derived Normalized Difference Vegetation Index (2010), a 10 m lidar DEM from 2007, and a 10 m canopy surface model were used to generate a model of predicted bias across marsh, mangrove, and cypress habitats. The predicted bias was then subtracted from...
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This habitat model was developed to delineate suitable habitat for coastal cactus wren (Campylorhynchus brunneicapillus) in southern California. A primary purpose of the model is to identify potential restoration sites that may not currently support cactus patches required by wrens, but which are otherwise highly suitable. These are areas that could be planted with cactus to increase wren populations, an important management objective for many land managers. We used the Partitioned Mahalanobis D2 modeling technique to construct alternative models with different combinations of environmental variables. Variables were calculated at each point in the center of a 150 m x 150 m cell in a grid of points across the landscape....
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This habitat model was developed to delineate a sampling frame for regional monitoring of coastal California gnatcatchers (Polioptila californica californica) to determine: 1) percent area occupied (PAO) in high and very high suitability habitat across conserved lands and participating military lands in the U.S. range in southern California; 2) changes in PAO over time; and 3) extinction and colonization rates. One purpose of the model is to identify areas recovering from disturbance, such as wildfire, that may not currently support coastal sage scrub vegetation used by coastal California gnatcatchers, but are otherwise highly suitable. In this way, we can monitor gnatcatcher occupancy associated with habitat changes...
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These data support poscrptR (Wright et al. 2021). poscrptR is a shiny app that predicts the probability of post-fire conifer regeneration for fire data supplied by the user. The predictive model was fit using presence/absence data collected in 4.4m radius plots (60 square meters). Please refer to Stewart et al. (2020) for more details concerning field data collection, the model fitting process, and limitations. Learn more about shiny apps at https://shiny.rstudio.com. The app is designed to simplify the process of predicting post-fire conifer regeneration under different precipitation and seed production scenarios. The app requires the user to upload two input data sets: 1. a raster of Relativized differenced Normalized...
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We generated a spatially explicit map of categories of expected occurrence and density associated with predicted concentrations of resident and transient common ravens (Corvus corax; ravens) using the residuals from a generalized linear regression between the occurrence and density parameters. These data support the following publication: Webster, S.C., O'Neil, S.T., Brussee, B.E., Coates, P.S., Jackson, P.J., Tull, J.C. and Delehanty, D.J., 2021. Spatial modeling of common raven density and occurrence helps guide landscape management within Great Basin sagebrush ecosystems. Human–Wildlife Interactions, 15(3), p.10. https://doi.org/10.26077/djza-3976.
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These data are the result of an intersection between a surface representing the delta-finite rate of population change and another surface representing Greater Sage-grouse abundance and space-use. It was used to rank candidate sites according to greatest potential impact to Greater Sage-grouse populations resulting from the presence of geothermal energy activity. In 2022, candidate geothermal sites were identified in Nevada and eastern California, then buffered by 10 kilometers. While the extent of the overall raster layer encompasses a very large swath of the western US, data values are limited to fall within these 10 kilometer buffers. These data support the following publications: Coates, P.S., Prochazka, B.G.,...
    map background search result map search result map LEAN-corrected San Francisco Bay Digital Elevation Model, 2018 LEAN-Corrected Collier County DEM for wetlands Coastal Cactus Wren Habitat Suitability Model for Southern California (2015) Coastal California Gnatcatcher Habitat Suitability Model for Southern California (2015) Data for Use in poscrptR Post-fire Conifer Regeneration Prediction Model Raven Occurrence and Density in the Great Basin Region of the Western United States (2007-2019) Median Estimates of Impact Potential from Geothermal Energy Production Activities on Greater Sage-Grouse Populations in Nevada and California (2022) LEAN-corrected San Francisco Bay Digital Elevation Model, 2018 LEAN-Corrected Collier County DEM for wetlands Coastal Cactus Wren Habitat Suitability Model for Southern California (2015) Coastal California Gnatcatcher Habitat Suitability Model for Southern California (2015) Median Estimates of Impact Potential from Geothermal Energy Production Activities on Greater Sage-Grouse Populations in Nevada and California (2022) Data for Use in poscrptR Post-fire Conifer Regeneration Prediction Model Raven Occurrence and Density in the Great Basin Region of the Western United States (2007-2019)