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Filters: partyWithName: John Y Takekawa (X) > Types: Map Service (X)

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Tracklines and associated observations were mapped and analyzed using ArcMap (ESRI, Redlands, CA). GPS data were recorded in NAD27 map datum and projected to an USGS Albers Equal Area Conic map projection for presentation and subsequent density analyses. Concatenated GPS and observation data were then used to generate point and line coverages in ArcMap (ESRI, Redlands, CA). We designed a custom analytic tool using ArcMap Model Builder that allows for the construction and export of user-specified and effort-adjusted spatial binning of species observations along continuous trackines. For the purposes of this report, we calculated seabird density estimates and marine mammal counts along continuous 3.0-kilometer and...
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Fragmentation and loss of natural habitat have important consequences for wild populations and can negatively affect long-term viability and resilience to environmental change. Salt marsh obligate species, such as those that occupy the San Francisco Bay Estuary in western North America, occupy already impaired habitats as result of human development and modifications and are highly susceptible to increased habitat loss and fragmentation due to global climate change. We examined the genetic variation of the California Ridgway’s rail ( Rallus obsoletus obsoletus), a state and federally endangered species that occurs within the fragmented salt marsh of the San Francisco Bay Estuary. We genotyped 107 rails across 11...
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Lidar-derived digital elevation models often contain a vertical bias due to vegetation. In areas with tidal influence the amount of bias can be ecologically significant, for example, by decreasing the expected inundation frequency. We generated a corrected digital elevation mode (DEM) for Suisun marsh using a modification of the Lidar Elevation Adjustment with NDVI (LEAN) technique (Buffington et al. 2016). GPS survey data (6912 points, collected across public and private land in 2018), Normalized Difference Vegetation Index (NDVI) derived from an airborne multispectral image (June 2018), a 1 m lidar DEM from September 2018, and a 1 m canopy surface model were used to generate models of predicted bias across the...
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The San Francisco Bay estuary contains the largest remaining expanse of tidal salt marshes in the western U.S. These marshes are home to a variety of federal and state protected species, such as the California clapper rail, California black rail, and the salt marsh harvest mouse. The estuary is also located on the Pacific Flyway, and is an important site for migrating and wintering birds. As climate conditions change, these salt marshes face a number of threats, including accelerated rates of sea-level rise, shifting precipitation, erosion, and more frequent and intense storms. Seas in the San Francisco Bay estuary have been rising 2.2 centimeters per decade, and could rise by as much as 1.24 meters by 2100, according...
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This data provides county level occurrence information for all individuals used in modelling potential exposure and spread of highly pathogenic avian influenza (HPAIv) from the 2021-2022 North American outbreak. The data set contains individual identifiers and taxa information, an indicator of exposure, exposure status (Susceptible, Exposed by HPAIv detection in the county, or Exposed by secondary contact with an exposed bird), and date of first occurrence of each individual bird and that bird's exposure status within each visited county. Herein, county refers to any county, parish, borough, census area, or geographic region identified in the associated geospatial data US_CAN_AI.shp (ESRI shapefile format). Occurrence...
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In California, the near-shore area where the ocean meets the land is a highly productive yet sensitive region that supports a wealth of wildlife, including several native bird species. These saltmarshes, mudflats, and shallow bays are not only critical for wildlife, but they also provide economic and recreational benefits to local communities. Today, sea-level rise, more frequent and stronger storms, saltwater intrusion, and warming water temperatures are among the threats that are altering these important habitats. To support future planning and conservation of California’s near-shore habitats, researchers examined current weather patterns, elevations, tides, and sediments at these sites to see how they affect...
Categories: Project; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: 2012, Bolinas Lagoon, CA, CASC, California, All tags...
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Recent interest has increased related to developing alternative sources of renewable energy to reduce dependence on oil. Some of those sources will include power generation infrastructure and support activities located within continental shelf waters, and potentially within deeper waters off the U.S. Pacific coast and beyond state waters (i.e., outside three nautical miles). Currently, the Bureau of Ocean Energy Management (BOEM) is considering renewable energy proposals off the coast of Oregon. The 2011-2012 Pacific Continental Shelf Environmental Assessment (PaCSEA) project is intended to provide new information on species composition, distribution, abundance, seasonal variation, and habitat utilization among...
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The timing of breeding is constrained in Arctic ecosystems and small temporal differences in when individuals breed can have large effects on fitness. Arctic ecosystems are generally warming more rapidly than other ecosystems which, for migratory species, can cause an imbalance, or mismatch, between when they have evolved to breed versus when it is optimal to breed environmentally. Geese are abundant herbivores summering in tundra ecosystems, and whose presence has important feedbacks on ecosystem processes. Some goose populations have already exhibited signs that spring vegetation phenology is occurring earlier than individuals are able to breed, with a consequent effect on their reproductive fitness. The magnitude...
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Over 50% of commercial and recreationally important fish species depend on coastal wetlands. In the Pacific Northwest, coastal wetlands, where the ocean meets the land, are highly productive areas that support a wealth of wildlife species from salmon to ducks. The tidal marshes, mudflats, and shallow bays of coastal estuaries link marine, freshwater, and terrestrial habitats and provide economic and recreational benefits to local communities. However, wetlands in this region and elsewhere are threatened by sea-level rise and other climate-related changes. According to a USFWS and NOAA report, between 2004 and 2009, 80,000 acres of wetland were lost on average each year, which is a significant increase from the previous...
    map background search result map search result map Fate of Endangered Species in San Francisco Bay Tidal Marshes with Sea-Level Rise Marshes to Mudflats: Climate Change Effects Along Coastal Estuaries in the Pacific Northwest Effects of Sea-Level Rise and Extreme Storms on California Coastal Habitats: Part 1 Pacific Continental Shelf Environmental Assessment (PaCSEA) GIS Resource Database A Century of Landscape Disturbance and Urbanization of the San Francisco Bay Region affects the Present-day Genetic Diversity of the California Ridgway’s Rail (Rallus obsoletus obsoletus) Bird Density and Marine Mammal Counts Based on 7700 Meter Bins in Southern California, 1999-2002 LEAN-Corrected DEM for Suisun Marsh Timing of Occurrence of Waterfowl in U.S. Counties and Canadian Counties, Boroughs, Census Districts, and Other Populated Area Designations with Modeled Exposure Status to Highly Pathogenic Avian Influenza Virus in 2021-2022 LEAN-Corrected DEM for Suisun Marsh Bird Density and Marine Mammal Counts Based on 7700 Meter Bins in Southern California, 1999-2002 Pacific Continental Shelf Environmental Assessment (PaCSEA) GIS Resource Database Effects of Sea-Level Rise and Extreme Storms on California Coastal Habitats: Part 1 Marshes to Mudflats: Climate Change Effects Along Coastal Estuaries in the Pacific Northwest Timing of Occurrence of Waterfowl in U.S. Counties and Canadian Counties, Boroughs, Census Districts, and Other Populated Area Designations with Modeled Exposure Status to Highly Pathogenic Avian Influenza Virus in 2021-2022