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The data set contains the results of experimental challenge of captive zebra finches with an American crow isolate of West Nile virus (WNV). Data include infectivity, mortality, viremia, oral shedding of virus, and serology for anti- WNV antibodies. Australian and Timor zebra finches were used in this study and both are useful as a laboratory model of an avian species with moderate susceptibility to WNV.
Categories: Data;
Types: Citation;
Tags: National Wildlife Health Center,
USGS Science Data Catalog (SDC),
West Nile virus,
immunoassay,
qRT-PCR,
Water velocities and discharge were measured in the lock chamber and immediately downstream of Brandon Road Lock on the Des Plaines River at river mile 286 on December 9-10, 2014 using Teledyne RDI Rio Grande 600 and 1200 kHz acoustic Doppler current profilers (ADCP). The data were georeferenced with a differential GPS receiver with submeter accuracy. These ADCP measurements were collected in support of the US Army Corps of Engineers Great Lakes and Mississippi River Interbasin Study (GLMRIS). Velocity measurements were processed using the Velocity Mapping Toolbox (Parsons and others, 2013) to derive temporally- and spatially-averaged water velocity values. Discharge measurements were processed with the QRev discharge...
Categories: Data;
Types: Citation;
Tags: Brandon Road Lock and Dam,
Des Plaines River,
Illinois,
Joliet,
Rockdale,
The data are population sizes of yeast Saccharaomyces cerevisiae growth in laboratory cultures over a period of several days with different levels of growth inhibitor cycloheximide.
Categories: Data;
Types: Citation;
Tags: Laboratory,
USGS Science Data Catalog (SDC),
carrying capacity,
growth rate,
heterogeneous resource distribution,
This dataset provides supporting information for the species distribution data used in the associated manuscript. Collections of five non-native fish species were made by a number of institutions, and several capture techniques were used. This dataset also includes number of individuals of each species captured at each locality.
Categories: Data;
Types: Citation;
Tags: Alafia River,
Aquatic Biology,
Florida,
Hillsborough River,
Little Manatee River,
Mangrove restoration has a strong potential to enhance the services provided by coastal wetlands on a number of Department of the Interior (DOI) managed lands throughout the southeastern United States of America. Services include storm protection, water quality improvement, and biological carbon sequestration. Forest structural attributes including basal area, tree height, and stem density by species are used to calculate above ground biomass and above ground productivity. Percent cover is used to asses the forest canopy health. The data collected for the soils are: bulk density, percent total Nitrogen, percent total Carbon, and selected samples percent total Phosporus. The forest structure plots were placed in...
Categories: Data;
Types: Citation;
Tags: Avicennia germinans,
Carbon,
Collier County,
Conocarpus erectus,
Ecology,
We characterized seafloor sediment conditions near the mouth of the Elwha River from underwater photographs taken every four hours from September 2011 to December 2013. A digital camera was affixed to a tripod that was deployed in approximately 10 meters of water (Tripod location from September 2011 to April 2013: 48.15333, -123.55931; tripod location from April 2013 to December 2013: 48.15407, -123.55444). Each photograph was qualitatively characterized as one of six categories: (1) base, or no sediment; (2) low sediment; (3) medium sediment; (4) high sediment; (5) turbid; or (6) kelp. For base conditions, no sediment was present on the seafloor. Low sediment conditions were characterized by a light dusting of...
Categories: Data;
Types: Citation,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Clallam County,
Elwha River,
Olympic Peninsula,
Remote Sensing,
State of Washington,
This USGS Data Release represents the data used to develop multiple linear regression models for estimating the loads of total nitrogen in small streams. Recursive partitioning and random forest regression were used to assess 85 geospatial, environmental, and watershed variables across 636 small (less than 585 square kilometers) watersheds to determine which variables are fundamentally important to the estimation of annual loads of total nitrogen. These data support the following publication: Kronholm, S.C., Capel, P.D., and Terziotti, Silvia, 2016, Statistically extracted fundamental watershed variables for estimating the loads of total nitrogen in small streams: Environmental Modeling and Assessment, 10 p., http://dx.doi.org/10.1007/s10666-016-9525-3.
Categories: Data;
Types: Citation;
Tags: USGS Science Data Catalog (SDC),
United states,
Water Quality,
fundamental variables,
national model,
Intracoelomic implantation of electronic tags has become a common method in fishery research, but rarely are fish examined by scientists after release to understand the extent that surgical incisions have healed. Walleye (Sander vitreus) are a valuable, highly-exploited fishery resource in the Laurentian Great Lakes. Here, fishery capture of walleye with internal acoustic transmitters combined with a high reward program provided multiple opportunities to examine photographs and quantify the status of surgical incisions. Walleye (n=926) from reef and river spawning populations in Lake Erie and Lake Huron were implanted with acoustic transmitters during spring spawning events from 2011 to 2016. Incisions were closed...
Categories: Data;
Types: Citation,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Detroit,
Lake Huron,
Lower Maumee,
Plant and animal tagging,
Sandusky,
This dataset is the largest global dataset to date of soil respiration, moisture, and temperature measurements, totaling >3800 observations representing 27 temperature manipulation studies, spanning nine biomes and nearly two decades of warming experiments. Data for this study were obtained from a combination of unpublished data and published literature values. We find that although warming increases soil respiration rates, there is limited evidence for a shifting respiration response with experimental warming. We also note a universal decline in the temperature sensitivity of respiration at soil temperatures >25°C. This dataset includes 3817 observations, from control (n=1812), first (i.e., lowest or sole) level...
Categories: Data,
Publication;
Types: Citation;
Tags: Boreal Forest,
Desert,
Ecology,
Meadow,
Northern Shrubland,
This dataset describes irrigation water use in Kansas in 2015. Volumes of water used, irrigated area, and average irrigation application depths are provided for three sets of subareas: (1) Irrigation water use analysis regions that include Groundwater Management Districts (GMDs) with the areas outside of GMDs divided into eastern, central, and western Kansas; (2) Regional Planning Areas (RPAs), which are 14 areas determined by the Kansas Water Office based on hydrologic and administrative boundaries, each with a set of goals outlined in the Kansas Water Vision (https://kwo.ks.gov/water-plan/water-vision); and (3) the 105 Kansas counties. Volumes of water used, irrigated area, and average application depths are also...
The point data file ("Soda Fire Point and Pasture Data (2016).Point Data.csv") includes 2016 vegetative cover values of exotic annual grass and perennial grass measured within three different types of plots for 75 pastures in the Soda Fire, which burned in 2015: 6m² plot using a grid-point intercept photo software, SamplePoint (Booth et al. 2006), 1m² quadrat using an unguided rapid ocular estimate in the field, 531m² circular plot using an unguided rapid ocular estimate in the field. Smaller plots were nested within larger plots. The pasture data file ("Soda Fire Point and Pasture Data (2016).Pasture Data.csv") includes pasture level metrics of area, elevation, precipitation, slope, heatload, soils, and herbicide...
Region(s) of distribution of Fourhorn Poacher (Hypsagonus quadricornis) (Valenciennes, 1829) in the Arctic as digitized for U.S. Geological Survey Scientific Investigations Report 2016-5038. For details on the project and purpose, see the report at https://doi.org/10.3133/sir20165038. Complete metadata for the collection of species datasets is in the metadata document "Dataset_for_Alaska_Marine_Fish_Ecology_Catalog.xml" at https://doi.org/10.5066/F7M61HD7. Source(s) for this digitized data layer are listed in the metadata Process Steps section. Note that the original source may show an extended area; some datasets were limited to the published map boundary. Distributions of marine fishes are shown in adjacent Arctic...
Categories: Data;
Types: Citation,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: (Valenciennes, 1829),
Alaska,
Arctic,
Arctic,
Beaufort Sea,
Region(s) of distribution of Inconnu (Stenodus leucichthys) (Güldenstadt, 1772) in the Arctic as digitized for U.S. Geological Survey Scientific Investigations Report 2016-5038. For details on the project and purpose, see the report at https://doi.org/10.3133/sir20165038. Complete metadata for the collection of species datasets is in the metadata document "Dataset_for_Alaska_Marine_Fish_Ecology_Catalog.xml" at https://doi.org/10.5066/F7M61HD7. Source(s) for this digitized data layer are listed in the metadata Process Steps section. Note that the original source may show an extended area; some datasets were limited to the published map boundary. Distributions of marine fishes are shown in adjacent Arctic seas where...
Categories: Data;
Types: Citation,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: (Güldenstadt, 1772),
Alaska,
Arctic,
Arctic,
Beaufort Sea,
Region(s) of distribution of Eyeshade Sculpin (Nautichthys pribilovius) (Jordan & Gilbert, 1898) in the Arctic as digitized for U.S. Geological Survey Scientific Investigations Report 2016-5038. For details on the project and purpose, see the report at https://doi.org/10.3133/sir20165038. Complete metadata for the collection of species datasets is in the metadata document "Dataset_for_Alaska_Marine_Fish_Ecology_Catalog.xml" at https://doi.org/10.5066/F7M61HD7. Source(s) for this digitized data layer are listed in the metadata Process Steps section. Note that the original source may show an extended area; some datasets were limited to the published map boundary. Distributions of marine fishes are shown in adjacent...
Categories: Data;
Types: Citation,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: (Jordan & Gilbert, 1898),
Alaska,
Arctic,
Arctic,
Beaufort Sea,
Region(s) of distribution of Saffron Cod (Eleginus gracilis) (Tilesius, 1810) in the Arctic as digitized for U.S. Geological Survey Scientific Investigations Report 2016-5038. For details on the project and purpose, see the report at https://doi.org/10.3133/sir20165038. Complete metadata for the collection of species datasets is in the metadata document "Dataset_for_Alaska_Marine_Fish_Ecology_Catalog.xml" at https://doi.org/10.5066/F7M61HD7. Source(s) for this digitized data layer are listed in the metadata Process Steps section. Note that the original source may show an extended area; some datasets were limited to the published map boundary. Distributions of marine fishes are shown in adjacent Arctic seas where...
Categories: Data;
Types: Citation,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: (Tilesius, 1810),
Alaska,
Arctic,
Arctic,
Beaufort Sea,
Region(s) of distribution of Chinook Salmon (Oncorhynchus tshawytscha) (Walbaum, 1792) in the Arctic as digitized for U.S. Geological Survey Scientific Investigations Report 2016-5038. For details on the project and purpose, see the report at https://doi.org/10.3133/sir20165038. Complete metadata for the collection of species datasets is in the metadata document "Dataset_for_Alaska_Marine_Fish_Ecology_Catalog.xml" at https://doi.org/10.5066/F7M61HD7. Source(s) for this digitized data layer are listed in the metadata Process Steps section. Note that the original source may show an extended area; some datasets were limited to the published map boundary. Distributions of marine fishes are shown in adjacent Arctic seas...
Categories: Data;
Types: Citation,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: (Walbaum, 1792),
Alaska,
Arctic,
Arctic,
Beaufort Sea,
Marine Arctic polygon distribution of Fourhorn Sculpin (Myoxocephalus quadricornis) (Linnaeus, 1758)
Region(s) of distribution of Fourhorn Sculpin (Myoxocephalus quadricornis) (Linnaeus, 1758) in the Arctic as digitized for U.S. Geological Survey Scientific Investigations Report 2016-5038. For details on the project and purpose, see the report at https://doi.org/10.3133/sir20165038. Complete metadata for the collection of species datasets is in the metadata document "Dataset_for_Alaska_Marine_Fish_Ecology_Catalog.xml" at https://doi.org/10.5066/F7M61HD7. Source(s) for this digitized data layer are listed in the metadata Process Steps section. Note that the original source may show an extended area; some datasets were limited to the published map boundary. Distributions of marine fishes are shown in adjacent Arctic...
Categories: Data;
Types: Citation,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: (Linnaeus, 1758),
Alaska,
Arctic,
Arctic,
Beaufort Sea,
Region(s) of distribution of Hamecon (Artediellus scaber) Knipowitsch, 1907 in the Arctic as digitized for U.S. Geological Survey Scientific Investigations Report 2016-5038. For details on the project and purpose, see the report at https://doi.org/10.3133/sir20165038. Complete metadata for the collection of species datasets is in the metadata document "Dataset_for_Alaska_Marine_Fish_Ecology_Catalog.xml" at https://doi.org/10.5066/F7M61HD7. Source(s) for this digitized data layer are listed in the metadata Process Steps section. Note that the original source may show an extended area; some datasets were limited to the published map boundary. Distributions of marine fishes are shown in adjacent Arctic seas where reliable...
Categories: Data;
Types: Citation,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Alaska,
Arctic,
Arctic,
Artediellus scaber,
Beaufort Sea,
Sandy ocean beaches in the United States are popular tourist and recreational destinations and constitute some of the most valuable real estate in the country. The boundary between land and water along the coastline is often the location of concentrated residential and commercial development and is frequently exposed to a range of natural hazards, which include flooding, storm effects, and coastal erosion. In response, the U.S. Geological Survey (USGS) is conducting a national assessment of coastal change hazards. One component of this research effort, the National Assessment of Shoreline Change Project, documents changes in shoreline position as a proxy for coastal change. Shoreline position is an easily understood...
Categories: Data;
Types: Citation,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Accretion,
Breton Islands,
Breton National Wildlife Refuge,
CMGP,
Chandeleur Islands,
The Sandy Hook artificial reef, located on the sea floor offshore of Sandy Hook, New Jersey was built to create habitat for marine life. The reef was created by the placement of heavy materials on the sea floor; ninety-five percent of the material in the Sandy Hook reef is rock. In 2000, the U.S. Geological Survey surveyed the area using a Simrad EM1000 multibeam echosounder mounted on the Canadian Coast Guard (CCG) ship Frederick G. Creed. The purpose of this multibeam survey, done in cooperation with the U.S. Army Corps of Engineers when the Creed was in the New York region in April 2000, was to map the bathymetry and backscatter intensity of the sea floor in the area of the Sandy Hook artificial reef. The collected...
Categories: Data;
Types: ArcGIS REST Map Service,
ArcGIS Service Definition,
Citation,
Downloadable,
Map Service;
Tags: GeoTIFF image,
Middle Atlantic Bight,
New Jersey,
New York,
New York Bight,
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