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Folders: ROOT > ScienceBase Catalog > Upper Midwest Environmental Sciences Center (UMESC) > Upper Midwest Environmental Sciences Center Data > Environmental DNA (eDNA) ( Show all descendants )

Location Folder Show Tree ROOT _ScienceBase Catalog __Upper Midwest Environmental Sciences Center (UMESC) ___Upper Midwest Environmental Sciences Center Data ____Environmental DNA (eDNA) Reporting the limits of detection (LOD) and quantification (LOQ) for environmental DNA assays: Data Simulated eDNA Occurrence data and Stan summaries of data Filters Date Range Past year (0) Past month (0) Past week (0) Past day (0) Custom range... To   Search Contacts Margaret E Hunter Upper Midwest Environmental Sciences Center Caren S Goldberg Katy E Klymus Joel P Stokdyk More... Categories Data (1) Tag Types Theme (1) Harvest Set (1) Place (1) Tag Schemes None (1) ISO 19115 Topic Category (1) View Results as: JSON ATOM CSV Browse Folder

Reporting the limits of detection (LOD) and quantification (LOQ) for environmental DNA assays: Data This data set was collected to provide examples and aid in developing a standardized way of determining LOD and LOQ for eDNA assays and has 3 data files. GEDWG_LOD_DATA3.csv is raw qPCR data from multiple labs running multiple standards of known concentration for eDNA assays they regularly use. Comparison-Data.csv is the merged data output from running a generic LOD/LOQ calculator script multiple times with different LOD model settings. The generic LOD/LOQ calculator script is available at: https://github.com/cmerkes/qPCR_LOD_Calc, and details about the multiple settings used are commented in the analysis script available at: https://github.com/cmerkes/LOD_Analysis Categories: Data; Tags: Environmental DNA, PCR, USGS Science Data Catalog (SDC), Whitney Genetics Laboratory, 555 Lester Avenue, Onalaska, Wisconsin, 54650, biota, All tags... detection, eDNA, invasive species, Fewer tags