Folders: ROOT > ScienceBase Catalog > Ocean Biodiversity Information System (OBIS) - USA Dataset Collection ( Show all descendants )
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The Puerto Rico Long-Term Coral Reef Monitoring Program (PRCRMP) database compilation includes raw biological data (by transect) from reef locations around the Puerto Rican archipelago. Substrate cover by sessile-benthic categories and fish, and motile megabenthic invertebrate taxonomic composition and densities have been characterized in these stations, with variable sampling event frequencies between 1999 to 2019. At present, 42 permanent stations are surveyed biannually (21 per year). For the benthic characterization, a set of five 10-meter-long permanent transects are surveyed at each station. Sessile-benthic reef communities are characterized by the continuous intercept chain-link method, following the Caribbean...
Categories: Data
Benthic census data were collected from sites around Micronesia as part of the ongoing Micronesia Challenge. Information on the program can be found at (www.micronesiareefmonitoring.com). Survey sites were selected around each island to be representative of natural environmental gradients, management, and major reef types. Thus, full site designs can be used to evaluate both island trends and site-specific trends. Benthic substrates were evaluated using a photo-quadrat technique. At each site, five 50-m transects were used to measure fishes, corals, and other benthic assemblages between 8–10 m on outer reefs, and at 3–5 m for inner lagoon reefs.Fifty photos were taken at 1-m intervals along each 50-m transect line....
Categories: Data
The purpose of the Coral Reef Evaluation and Monitoring Project (CREMP) is to monitor the status and trends of selected reefs in the Florida Keys National Marine Sanctuary(FKNMS). CREMP assessments have been conducted annually at fixed sites since 1996 and data collected provides information on the temporal changes in benthic cover and diversity of stony corals and associated marine flora and fauna. The core field methods continue to be underwater videography and timed coral species inventories. Findings presented in this report include data from 109 stations at 37 sites sampled from 1996 through 2008 in the Florida Keys and 1999 through 2008 in the Dry Tortugas. The report describes the annual differences (between...
Categories: Data;
Types: NetCDF OPeNDAP Service;
Tags: Coral Reef Evaluation and Monitoring Project Florida Keys 2015,
about,
absence,
accepted,
acceptedNameAuthorship,
The purpose of the Coral Reef Evaluation and Monitoring Project (CREMP) is to monitor the status and trends of selected reefs in the Florida Keys National Marine Sanctuary(FKNMS). CREMP assessments have been conducted annually at fixed sites since 1996 and data collected provides information on the temporal changes in benthic cover and diversity of stony corals and associated marine flora and fauna. The core field methods continue to be underwater videography and timed coral species inventories. Findings presented in this report include data from 109 stations at 37 sites sampled from 1996 through 2008 in the Florida Keys and 1999 through 2008 in the Dry Tortugas. The report describes the annual differences (between...
Categories: Data;
Types: NetCDF OPeNDAP Service;
Tags: Coral Reef Evaluation and Monitoring Project (CREMP),
about,
absence,
accepted,
acceptedNameAuthorship,
This dataset contains benthic epifauna biomass and abundance data collected in the Chukchi Sea, U.S. Arctic during the 9 August - 3 September 2015 Arctic Marine Biodiversity Observing Network (AMBON) research cruise aboard the vessel Norseman II. The dataset contains two comma separated values (csv) files exported from Microsoft Excel. These data were generated from epifauna samples conducted using beam trawls during the research cruise. The data in the file named AMBON2015_epifauna_abundance_DWC.csv describes abundance per taxon of epibenthic invertebrates. The data in the file named AMBON2015_epifauna_biomass_DWC.csv describes biomass per taxon of epibenthic invertebrates. This dataset was transformed into a table...
Categories: Data;
Tags: AMBON,
Acanthonotozoma,
Acanthonotozoma inflatum,
Acanthonotozoma rusanovae,
Acanthostepheia behringiensis,
The purpose of the Coral Reef Evaluation and Monitoring Project (CREMP) is to monitor the status and trends of selected reefs in the Florida Keys National Marine Sanctuary(FKNMS). CREMP assessments have been conducted annually at fixed sites since 1996 and data collected provides information on the temporal changes in benthic cover and diversity of stony corals and associated marine flora and fauna. The core field methods continue to be underwater videography and timed coral species inventories. Findings presented in this report include data from 109 stations at 37 sites sampled from 1996 through 2008 in the Florida Keys and 1999 through 2008 in the Dry Tortugas. The report describes the annual differences (between...
Categories: Data;
Types: NetCDF OPeNDAP Service;
Tags: Coral Reef Evaluation and Monitoring Project Florida Keys 2016,
about,
absence,
accepted,
acceptedNameAuthorship,
The South Florida Fish and Invertebrate Assessment Network (FIAN) is a monitoring project within the Comprehensive Everglades Restoration Plan (CERP). It is an element of the Southern Estuaries module of the Monitoring and Assessment Plan (MAP).The FIAN is designed to support the four broad objectives of MAP: (1) to establish a pre-CERP reference state, including variability, for each of the performance measures; (2) to determine the status and trends in the performance measures; (3) to detect unexpected responses of the ecosystem to changes in stressors resulting from CERP activities; and (4) to support scientific investigations designed to increase ecosystem understanding, cause-and-effect, and interpretation...
Observations of porifera and cnidarian on the New England Seamount Chain and in deep sea canyons in the Northwestern Atlantic continental margin. Observations were made using underwater video footage collected by the Okeanos Explorers’ ROV Deep Discoverer on cruise legs EX1404L1, EX1404L2 and EX1404L3. Individuals were classified to the lowest possible taxonomic unit and matched to equal or lowest level of taxon in the World Register of Marine Species (WoRMS). This dataset describes the site and identifies the location and depth of taxonomic observations. Funding to standardize these data to the Darwin Core for sharing through the Ocean Biodiversity Information System was from NOAA grant NA15NOA4000200. This dataset...
Categories: Data
A research program has been initiated by the Minerals Management Service (Contract No. 1435-01-99-CT-30991) to gain better knowledge of the benthic communities of the deep Gulf of Mexico entitled “The Deepwater Program: Northern Gulf of Mexico Continental Slope Habitat and Benthic Ecology.” Increasing exploration and exploitation of fossil hydrocarbon resources in the deep-sea prompted the Minerals Management Service of the U.S. Department of the Interior to support an investigation of the structure and function of the assemblages of organisms that live in association with the sea floor in the deep-sea. The program, Deep Gulf of Mexico Benthos or DGoMB, is studying the northern Gulf of Mexico (GOM) continental slope...
Categories: Data
MICROBIS is the data management to support the International Census of Marine Microbes. It is an environment that is capable of handling information that identifies groups of microbes (whether the information be traditional descriptions or molecular markers), information about location, chemical and physical characteristics of the habitats from which samples are taken. It includes old (legacy) data as well as newly emerging information. These data were collected with various methods. Including molecular DNA extraction and fingerprinting. We welcome input from possible contributors and users of the information.
Categories: Data
Abstract Written by OBIS-USA using Excerpts from CRED Homepage Quantitative assessment and monitoring of shallow reef fish assemblages is conducted around the US Pacific Islands as an integral part of the NOAA/NMFS/PIFSC Coral Reef Ecosystem Division's mission to improve our scientific understanding of these fish resources and related ecosystems. As fish are the primary sustainable living resource on Pacific coral reefs, results contribute to the scientific basis essential for sound management. Related objectives include: creating a fish baseline to measure marine protected area (MPA) effectiveness; monitoring size-frequency of fish assemblages; assessing the status of target, indicator or keystone species; assessing...
Categories: Data
The Texas Parks and Wildlife Department (TPWD) utilizes several sampling gears for fisheries-independent monitoring of finfish and shellfish communities. They include bag seines, trawls, gill nets and oyster dredges. TPWD uses multiple gears in a random sampling protocol, and they identify (to the lowest taxonomic unit possible) and count everything that they collect. This dataset contains bag seine data collected for the Aransas bay system in Texas from 1977 to 2008. Collected data also included spatial and temporal information describing the sample location and time, collection gear information, hydrological data (e.g. dissolved oxygen, water temperature, and salinity), weather conditions, species caught, and...
These data describe the abundance of reef fish as part of the Santa Barbara Coastal LTER program (SBC LTER) to track long-term patterns in kelp forest reef species abundance and diversity. The study began in 2000 in the Santa Barbara Channel, California, USA, and the time series is ongoing and updated approximately annually. Abundances of all taxa of resident kelp forest fish encountered along permanent transects are recorded at nine reef sites located along the mainland coast of the Santa Barbara Channel and at two sites on the north side of Santa Cruz Island. These sites reflect several oceanographic regimes in the channel and vary in distance from sources of terrestrial runoff. In these surveys, fish were counted...
The Observer Program database consists of fish, invertebrate, and marine mammal observations collected by fishery biologists while deployed on board commercial fishing vessels or at shoreside processing plants participating in the Bering Sea and Gulf of Alaska groundfish fisheries. This database covers observations from 1993-2004. The specific data components collected are outlined in the Groundfish Observer Manual. Once received by NOAA Fisheries, these data are extensively checked for quality. Each record represents the summary of all the observations made for a given taxa in a given year from each 20km by 20km grid square; counts and weights are statistical estimates.
Categories: Data
This dataset contains zooplankton species distribution and abundance data collected in the Chukchi Sea during the August 2017 Arctic Marine Biodiversity Observing Network (AMBON) research cruise. The dataset is a comma separate values file (csv) exported from a Microsoft Excel spreadsheet. The data include the location, date, time, depth, abundance and biomass of zooplankton collected during the 2017 AMBON cruise. Zooplankton were caught with traditional 150µm plankton nets and taxonomically identified. Each data file include the location, date, time, depth, and identification of zooplankton taxa collected during the 2015 AMBON cruise. The data in the file named AMBON2017_Zooplankton_Abundance_150_DC.csv and AMBON2017_505_Zooplankton_Abundance_DWC.csv...
Categories: Data;
Tags: AMBON,
Acartia,
Acartia longiremis,
Aeginopsis laurentii,
Arctic Marine Biodiversity Observation Network,
The purpose of the Coral Reef Evaluation and Monitoring Project (CREMP) is to monitor the status and trends of selected reefs in the Florida Keys National Marine Sanctuary(FKNMS). CREMP assessments have been conducted annually at fixed sites since 1996 and data collected provides information on the temporal changes in benthic cover and diversity of stony corals and associated marine flora and fauna. The core field methods continue to be underwater videography and timed coral species inventories. Findings presented in this report include data from 109 stations at 37 sites sampled from 1996 through 2008 in the Florida Keys and 1999 through 2008 in the Dry Tortugas. The report describes the annual differences (between...
Categories: Data;
Types: NetCDF OPeNDAP Service;
Tags: Coral Reef Evaluation and Monitoring Project (CREMP),
about,
absence,
accepted,
acceptedNameAuthorship,
In 1998, the Florida Fish and Wildlife Conservation Commission's (FWC) Fisheries Independent Monitoring (FIM) program began a long-term monitoring effort of key reef fish populations in the Florida Keys National Marine Sanctuary. This effort was aimed at evaluating the relative abundance, size structure, and habitat utilization of specific reef fish species that are targeted by commercial and recreational fisheries. The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties...
Categories: Data;
Types: NetCDF OPeNDAP Service;
Tags: Florida Keys National Marine Sanctuaries Reef Fish Monitoring,
array,
array-data,
basis,
basisOfRecord,
The Texas Parks and Wildlife Department (TPWD) utilizes several sampling gears for fisheries-independent monitoring of finfish and shellfish communities. They include bag seines, trawls, gill nets and oyster dredges. TPWD uses multiple gears in a random sampling protocol, and they identify (to the lowest taxonomic unit possible) and count everything that they collect. This dataset contains bay trawl data collected for the Matagorda bay system in Texas from 1982 to 2008. Collected data also included spatial and temporal information describing the sample location and time, collection gear information, hydrological data (e.g. dissolved oxygen, water temperature, and salinity), weather conditions, species caught, and...
The Texas Parks and Wildlife Department (TPWD) utilizes several sampling gears for fisheries-independent monitoring of finfish and shellfish communities. They include bag seines, trawls, gill nets and oyster dredges. TPWD uses multiple gears in a random sampling protocol, and they identify (to the lowest taxonomic unit possible) and count everything that they collect. This dataset contains bag seine data collected for the Sabine Lake bay system in Texas from 1986 to 2008. Collected data also included spatial and temporal information describing the sample location and time, collection gear information, hydrological data (e.g. dissolved oxygen, water temperature, and salinity), weather conditions, species caught,...
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