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Accurate input data are important for making site-specific projections of tidal wetlands into the future. We developed bias-corrected digital elevation models (DEM) using the LEAN approach (LiDAR Elevation Adjustment with NDVI). LEAN DEMs were used as the initial elevation for model projections. Further, we conducted elevation and vegetation surveys across each study site to characterize elevation profiles of dominant species, which were used to inform organic productivity functions in WARMER-2.
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Understanding the rates and patterns of tidal wetland elevation changes relative to sea-level is essential for understanding the extent of potential wetland loss over the coming years. Using an enhanced and more flexible modeling framework of an ecosystem model (WARMER-2), we explored sea-level rise (SLR) impacts on wetland elevations and carbon sequestration rates through 2100 by considering plant community transitions, salinity effects on productivity, and changes in sediment availability. We incorporated local experimental results for plant productivity relative to inundation and salinity into a species transition model, as well as site-level estimates of organic matter decomposition. The revised modeling framework...
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Wind speed, wind direction (3D) and gas concentrations are measured at 10 Hz and statistically processed using the eddy covariance technique to half-hour estimates of flux rates of gas exchange between the ecosystem and atmosphere. Three gases were measured: carbon dioxide, methane and water vapor. Simultaneous measurements of environmental drivers are also measured and recorded as half-hourly values: photosynthetic photon flux density, downwelling and upwelling short and long wave radiation, air temperature, relative humidity and precipitation. Variable names and units follow AmeriFlux and FLUXNET standards. This site is a saltwater herbaceous marsh near Lake Hermitage, LA and Barataria Bay.
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Emergent tidal marsh derived from National Wetlands Inventory
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Habitat projections from the WARMER-2 model for four tidal wetland sites in San Francisco Bay estuary under the constant sediment scenario, plus 0.2 ppt per decade salinity scenario, and the community transition organic productivity function under a 99 cm by 2100 sea-level rise scenario. Results are the average from one hundred Monte Carlo simulations.
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This dataset contains avian survey observations across four tidal marsh areas around San Francisco Bay. Multiple surveys were conducted around both high and low tides during the winter of 2010/11. Each survey alternated between scan and focals. During scans, all observable birds were counted. During focals, the behavior of a single, randomly selected bird was observed. Water level data was collected concurrently at each site and is provided with the avian survey data. These data support the following publication: Thorne, K.M., Spragens, K.A., Buffington, K.J., Rosencranz, J.A. and Takekawa, J., 2019. Flooding regimes increase avian predation on wildlife prey in tidal marsh ecosystems. Ecology and evolution, 9(3),...
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Projections of marsh elevation change with WARMER-2 across five regions of the San Francisco Bay Delta (Cache Yolo, South Delta, North Delta, Central Delta, and Suisun). The model was run across a range of initial elevations for each region and for scenarios of sea-level rise (30, 61, 91, 122, 152, 183, 305 cm by 2100), sediment availability (historic, constant, declining, and increase), and with and without a temporally dynamic tidal range. Results from the Delta Simulation Model 2 hydrodynamic model were used to calculate rates of tide range increase with sea-level rise. WARMER-2 was calibrated using soil cores from Callaway et al 2012 (Rush Ranch and Browns Island cores), and a soil core from Miners Slough. ...
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Wind speed, wind direction (3D) and gas concentrations are measured at 10 Hz and statistically processed using the eddy covariance technique to half-hour estimates of flux rates of gas exchange between the ecosystem and atmosphere. Three gases were measured: carbon dioxide, methane and water vapor. Simultaneous measurements of environmental drivers are also measured and recorded as half-hourly values: photosynthetic photon flux density, downwelling and upwelling short and long wave radiation, air temperature, relative humidity and precipitation. Variable names and units follow AmeriFlux and FLUXNET standards. This site is a saltwater herbaceous marsh near Lake Hermitage, LA and Barataria Bay.
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The sensitivity of tidal marshes to environmental changes that result from sea-level rise or drought conditions is uncertain. We used a controlled greenhouse experiment and factorial flooding x salinity treatments to explore the differential responses of three tidal marsh plant species. Each species exhibited unique responses, with negative responses to increased salinity and longer flooding, but only limited evidence for interactive effects. These data support the following publication: Buffington, K.J., Goodman, A.C., Freeman, C.M. and Thorne, K.M., 2020. Testing the interactive effects of flooding and salinity on tidal marsh plant productivity. Aquatic Botany, p.103231.
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Fifty-one tidal marsh sites across five regions (sub-embayments) were surveyed in the Delta, Suisun Bay, San Pablo Bay, central San Francisco Bay, and South San Francisco Bay. Vegetation surveys spanned ten years, from July 2008 to January 2018. A total of 5,112 plots were surveyed. Plots were positioned on transects along an elevation gradient and evenly distributed across each site, where possible, to capture spatial variability along elevation and distance gradients. At each plot, percent cover of all plant species, bare ground, and litter as well as average height was visually assessed within a 0.25 m2 quadrat. Total plant cover in a plot could exceed 100 percent due to vegetation layering. Bare ground and litter...


    map background search result map search result map Tidal Emergent Marsh in the GCP LCC from NWI San Francisco Bay Tidal Marsh Avian Predator Surveys, 2010 Pacific Northwest tidal marsh plant biomass from a 2017 greenhouse experiment with flooding and salinity manipulations Tidal Wetland Elevation Projections for Five San Francisco Bay Delta Regions Using WARMER-2, 2000-2100 WARMER-2 Model Inputs and Projections for Three Tidal Wetland Sites Across San Francisco Bay Estuary WARMER-2 Model Inputs for Three Tidal Wetland Sites Across San Francisco Bay Estuary Tidal Wetland Habitat Projections with Sea-level Rise Across Sites in the San Francisco Bay Estuary (2020-2100) AmeriFlux BASE US-LA3 Barataria Bay Saline Marsh, Ver. 1-5 Science Data Catalog submission - USGS:3534c187-2c23-4ac6-9c75-e6b8afc56078 Marsh Vegetation Surveys Across the San Francisco Bay Estuary, 2008-2018 AmeriFlux BASE US-LA3 Barataria Bay Saline Marsh, Ver. 1-5 Science Data Catalog submission - USGS:3534c187-2c23-4ac6-9c75-e6b8afc56078 Pacific Northwest tidal marsh plant biomass from a 2017 greenhouse experiment with flooding and salinity manipulations WARMER-2 Model Inputs and Projections for Three Tidal Wetland Sites Across San Francisco Bay Estuary WARMER-2 Model Inputs for Three Tidal Wetland Sites Across San Francisco Bay Estuary Tidal Wetland Habitat Projections with Sea-level Rise Across Sites in the San Francisco Bay Estuary (2020-2100) San Francisco Bay Tidal Marsh Avian Predator Surveys, 2010 Marsh Vegetation Surveys Across the San Francisco Bay Estuary, 2008-2018 Tidal Wetland Elevation Projections for Five San Francisco Bay Delta Regions Using WARMER-2, 2000-2100 Tidal Emergent Marsh in the GCP LCC from NWI