Filters: Tags: genome assembly (X)
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This dataset contains the reference genome assembly, created from 23 Hawaiian hoary bats collected across the four Hawaiian Islands, Hawaii, Maui, Oahu, and Kauai. These data were collected in order to examine the phylogenetic history and patterns of genetic variation in the Hawaiian hoary bat. The raw sequencing data are deposited to National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) under accession PRJNA559902. The data are archived in GenBank at the following URL: https://www.ncbi.nlm.nih.gov/bioproject/559902. The data are stored in two files, one in a text-based FASTA format (HHB genome 2009-2015.fa) and the other in general feature format (HHB genome features 2009-2015.gff), both...
This dataset contains single nucleotide polymorphisim (SNP) genotypes for 23 Hawaiian hoary bats collected across four Hawaiian Islands, Hawaii, Maui, Oahu, and Kauai. The data were collected in order to examine the phylogenetic history and patterns of genetic variation in the Hawaiian hoary bat. The raw sequencing data are deposited to National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) under accession PRJNA559902. The data are archived in GenBank at the following URL: https://www.ncbi.nlm.nih.gov/bioproject/559902. Note to users: ordinary text editors cannot open large files, users are advised to utilize a specialized text editor (e.g., EmEditor) or genetic bioinformatic-type software...
Whole genome sequence data from ten Neosho madtom originating from three geographically separated populations. A Neosho madtom genome was de novo assembled and genome size and content were assessed. Genomic DNA was used to construct one small insert paired-end library per fish with an approximate insert size of 300 bp. The library was constructed following the manufacturer’s protocol with reagents supplied in Illumina’s TruSeq DNA PCR-Free sample preparation kit (#FC-121-3001).
This dataset features tissue collection information, reference genome assembly, and single nucleotide polymorphisim (SNP) genotypes of 23 Hawaiian hoary bats collected across four Hawaiian Islands, Hawaii, Maui, Oahu, and Kauai. These data were collected in order to examine the phylogenetic history and patterns of genetic variation in the Hawaiian hoary bat. The raw sequencing data are deposited to National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) under accession PRJNA559902. The data are archived in GenBank at the following URL: https://www.ncbi.nlm.nih.gov/bioproject/559902.
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