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Fragment data from 11 nuclear microsatellite loci and sequence data from the mitochondrial cytochrome b gene were gathered from Arctic cod (Boreogadus saida) in the Beaufort and Chukchi seas. Mitogenomic analyses of Arctic cod and three other co-distributed gadoids (Polar cod [Arctogadus glacialis], Saffron cod [Eleginus gracilis], Walleye Pollock [Gadus chalcogrammus]) were also completed. Transcriptomic analyses of Arctic cod were used to identify genes associated with environmental perturbations. Genome-wide scans using RAD-Seq of Arctic cod and the co-distributed Polar Cod were collected.
Categories: Data;
Tags: Alaska,
Aleutian Islands,
Aquatic Biology,
Aquatic ecosystems,
Aquatic sciences, All tags...
Arctic cod,
Arctogadus glacialis,
Beaufort Sea,
Beaufort Sea,
Bering Sea,
Biota,
Boreogadus saida,
Canada,
Chukchi Sea,
DNA sequencing,
DNA, Mitochondrial,
Eleginus gracilis,
Environment,
Fish,
Fisheries,
Gadus chalcogrammus,
Gene flow,
Genetic structure,
Genetic variance,
Genetics,
Genetics,
Genomics,
Gulf of Alaska,
Gulf of Saint Lawrence,
Marine habitat,
Microsatellite Repeats,
Norton Sound,
Nova Scotia,
Polymerase chain reaction,
Population dynamics,
Population genetics,
Saffron cod,
Systematics and taxonomy,
USGS Science Data Catalog (SDC),
Walleye Pollock,
Wildlife Biology,
Yukon Territory, Fewer tags
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This data set contains sampling information, allele sizes of 11 microsatellite loci, and Genbank accession numbers of ddRAD seq results for scoters (Melanitta sp.). Microsatellite data is provided for three North American species of scoter (black scoter, M. americana n = 61; white-winged scoter, M. deglandi, n = 208; surf scoter, M. perspicillata, n = 145) and their European congeners (common scoter, M. nigra, n = 19; velvet scoter, M. fusca, n = 20). Individuals with ddRAD results include 27 black scoters, 4 common scoters, 32 surf scoters, 28 white-winged scoters, and 4 velvet scoters.
Categories: Data;
Tags: Alaska,
Alleles,
Animals/Vertebrates,
Baja California,
Biota, All tags...
Birds,
British Columbia,
Canada,
Coastal ecosystems,
DNA,
DNA Primers,
Denmark,
Environment,
Estuarine habitat,
Gene Flow,
Genetic markers,
Genetic structure,
Genetics,
Genetics,
Melanitta americana,
Melanitta deglandi,
Melanitta fusca,
Melanitta nigra,
Melanitta perspicillata,
Mexico,
Microsatellite Repeats,
Midtjylland,
Migratory birds,
New Brunswick,
Newfoundland and Labrador,
Northwest Territories,
Nova Scotia,
Polymerase chain reaction,
Population dynamics,
Quebec,
Rhode Island,
Saskatchewan,
Seasonal distribution,
Seasonal movement,
Sjælland,
Syddanmark,
Terrestrial ecosystems,
USGS Science Data Catalog (SDC),
Virginia,
Washington,
Waterfowl,
Wetland ecosystems,
Wildlife,
Wildlife Biology, Fewer tags
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Data set containing specimen information and GenBank accession numbers for five nuclear DNA introns and mitochondrial DNA control region sequence information for the blue-winged duck complex of species sampled in Africa, Asia, Australia, and North and South America.
Categories: Data;
Tags: Alaska,
Animals/Vertebrates,
Argentina,
Australia,
Azzerbaijan, All tags...
Biological Classification,
Biota,
Birds,
Bolivia,
California,
Canada,
Colorado,
Columbia,
Ducks/Geese/Swan,
Earth Science,
Environment,
Evolution,
Genetic Diversity,
Genetics,
Genetics, Population,
Guyana,
Kazakhstan,
Mongolia,
Mozambique,
New Zealand,
North Dakota,
Oregon,
Peru,
Phylogeny,
Phylogeography,
Russia,
South Africa,
South Dakota,
Taxonomy,
USGS Science Data Catalog (SDC),
Utah,
Wildlife Biology,
Zimbabwe, Fewer tags
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This data set describes nuclear microsatellite genotypes derived from eight autosomal loci (Aph02, Aph11, Aalµ1, Sfiµ4, Smo4, Smo7, Smo12, and Sfiµ8) and accession numbers for double digest restriction-site associated DNA (ddRAD) sequences.
Categories: Data;
Tags: Alaska,
Alleles,
Animals/Vertebrates,
Barrow's Goldeneye,
Biota, All tags...
Birds,
British Columbia,
Bucephala clangula,
Bucephala islandica,
Canada,
Coastal ecosystems,
Common Goldeneye,
DNA,
Denmark,
Environment,
Estuarine habitat,
Gene flow,
Genetic markers,
Genetics,
Genetics,
Genotype,
Microsatellite Repeats,
Migratory birds,
Ontario,
Polymerase chain reaction,
Population genetics,
Terrestrial ecosystems,
USGS Science Data Catalog (SDC),
Waterfowl,
Waterfowl,
Wildlife,
Wildlife Biology,
Yukon Territory, Fewer tags
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This data set describes nuclear microsatellite genotypes derived from eight autosomal loci (BCA6, BCA9, BCA11, BCA5, CRG, OXY13, TSP1.20.09 and TSP1.20.46) and a 366 base pair portion of the mitochondrial control region. A total of 665 Greater White-fronted Geese were examined by genotyping and 518 by sequencing with samples coming from its circumpolar range representing multiple flyways (Midcontinent, Pacific, Greenland, Palearctic). The sex of most samples was determined in the field by morphology or cloacal examination. Version History: First release: June 2018 Revised: July 2018 (ver. 2.0)
Categories: Data,
Data Release - Revised;
Tags: Alaska,
Alleles,
Anadyr,
Anderson River,
Animals/vertebrates, All tags...
Anser albifrons,
Biota,
Birds,
Bristol Bay,
Brooks Range,
Colville River,
Cook Inlet,
DNA,
Ducks/Geese/Swans,
Environment,
Gene Flow,
Genetic Markers,
Genetic Variance,
Genetics,
Genetics,
Genotype,
Greater White-Fronted Goose,
Greenland,
Innoko National Wildlife Refuge,
Ireland,
Kanuti National Wildife Refuge,
Kava,
Kent Peninsula,
Kolyma,
Koyukuk National Wildlife Refuge,
Kuparuk River,
Kuskokwim River,
Lena,
MacKenzie River,
Microsatellite Repeats,
Molecular biology,
North Slope,
Northwest Territories,
Nunavut,
Old Crow Flats,
Point Lay,
Polymerase chain reaction,
Population differentiation,
Population genetics,
Queen Maud Gulf,
Rasmussen Basin,
Selawik National Wildlife Refuge,
Speciation (biological),
Taimyr,
Terrestrial Ecosystems,
Terrestrial ecosystems,
USGS Science Data Catalog (SDC),
Vaygach,
Victoria Island,
Wildlife,
Wildlife Biology,
Yana,
Yukon,
Yukon River,
Yukon–Kuskokwim Delta, Fewer tags
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