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Sea Otter Gene Transcription Data from Kodiak, the Alaska Peninsula, and Prince William Sound, Alaska, 2005-2012

Dates

Publication Date
Start Date
2005
End Date
2012

Citation

Bowen, L., Ballachey, B.E., Bodkin, J.L., Miles, A. K., Esler D. and Kloecker, K. A., 2017, Sea Otter Gene Transcription Data from Kodiak, the Alaska Peninsula and Prince William Sound, Alaska, 2005-2012: U.S. Geological Survey data release, https://doi.org/10.5066/F789141P.

Summary

This data set includes capture location, date, sex, and results of molecular gene transcription analysis for sea otters (Enhydra lutris) sampled in western Prince William Sound (WPWS), Alaska and comparison samples collected from Kodiak and the Alaska Peninsula, and reference samples collected from captive animals. Samples were collected between 2005 and 2012. Molecular gene transcription is the process by which information from the DNA template of a particular gene is transcribed into messenger RNA (mRNA) and eventually translated into a functional protein. The amount of mRNA transcribed from a particular gene is physiologically dictated. Altered levels of gene transcripts provide observable signs of health impairment.

Contacts

Point of Contact :
Alaska Science Center
Originator :
Lizabeth Bowen, Brenda Ballachey, James Bodkin, A. Keith Miles, Daniel N Esler, Kim Kloecker
Metadata Contact :
Alaska Science Center
Publisher :
Alaska Science Center
Distributor :
USGS ScienceBase Team
USGS Mission Area :
Ecosystems
SDC Data Owner :
Alaska Science Center

Attached Files

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GWA_LingeringOil_SeaOtterGeneTranscription_Alaska_2005-2012_metadata.html 74.45 KB text/html
SeaOtterGeneTranscription_Data_Alaska_2005-2012.csv 35.89 KB text/csv

Purpose

These data are part of a body of work evaluating spatial and temporal variation in molecular gene transcription as an indicator of exposure of sea otters to residual oil from the 1989 Exxon Valdez Oil Spill (EVOS). The sea otter biomarker project is a component of the integrated Long-term Monitoring of Marine Conditions and Injured Resources and Services submitted by McCammon et al. in spring 2011 to the Exxon Valdez Oil Spill Trustees Council (EVOSTC). Sea otter populations in Prince William Sound (PWS) were injured as a result of the Exxon Valdez oil spill, with evidence for both immediate acute mortality and longer term injury from chronic exposure to oil spilled in 1989. It appears that full recovery was still not complete as of 2011. Prior EVOSTC projects have examined continuing exposure to lingering oil as a factor constraining recovery, using biomarker assays (gene transcription assays to evaluate exposure and health of sea otters). For sea otters, recent studies have shown that abundance in the vicinity of northern Knight Island has not yet returned to pre-spill levels, and that otters are foraging in areas where lingering oil persists in sediments. Most recently, gene transcription assays have been developed, using an array of genes to specifically quantify oil exposure and health status of sea otters.

Additional Information

Identifiers

Type Scheme Key
DOI https://www.sciencebase.gov/vocab/category/item/identifier doi:10.5066/F789141P

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