Code to fit an Integrated Population Model for the Foothill Yellow-legged Frog, Rana boylii, in Northern California

Code for fitting Integrated Population Models was adapted from Kéry and Schaub (2012). The Goodness-of-Fit test for the egg-mass count state space model was based on Besbeas and Morgan (2014). Analyses were performed in R version 3.6.1 (R Core Team 2019). References: Besbeas, P. and Morgan, B.J., 2014. Goodness‐of‐fit of integrated population models using calibrated simulation. Methods in Ecology and Evolution, 5(12), pp.1373-1382. https://doi.org/10.1111/2041-210X.12279 Kéry, M. and Schaub, M., 2012. Bayesian population analysis using WinBUGS: a hierarchical perspective. Academic Press. R Core Team, 2019. R: a language and environment for statistical computing. https://www.r-project.org/