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  4. Data Supporting: Draft Genome Sequence of a Novel Calicivirus from a Brown Bullhead (Ameiurus nebulosus) from Lake Memphremagog, VT

Data Supporting: Draft Genome Sequence of a Novel Calicivirus from a Brown Bullhead (Ameiurus nebulosus) from Lake Memphremagog, VT

Dates

Publication Date
Start Date
2015-07-07
End Date
2021-10-10

Citation

Iwanowicz, L.R., Blazer, V.S., Jones, T., Bodnar, M., Eckstrom, K., Dragon, J.A. and Emerson, P., 2022, Data Supporting: Draft Genome Sequence of a Novel Calicivirus from a Brown Bullhead (Ameiurus nebulosus) from Lake Memphremagog, VT: U.S. Geological Survey data release, https://doi.org/10.5066/P9MPFVMX.

Summary

We report a draft genome of a previously undescribed calicivirus from a single brown bullhead inhabiting Lake Memphremagog, Vermont/Quebec. The genome is 7413 nt in length and is most similar to the Atlantic salmon calicivirus (nucleotide identity; 64.7%).

Contacts

Point of Contact :
Luke Iwanowicz
Originator :
Luke Iwanowicz, Vicki S Blazer, Tom Jones, Matthew Bodnar, Korin Eckstrom, Julie A. Dragon, Peter Emerson
Metadata Contact :
Luke Iwanowicz
Publisher :
National Center for Biotechnology Information
Distributor :
U.S. Geological Survey - ScienceBase
SDC Data Owner :
Eastern Ecological Science Center
USGS Mission Area :
Ecosystems

Attached Files

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MRA.metadata121021.xml
Original FGDC Metadata
View 		20.46 KB application/fgdc+xml
mapping.txt 353.75 KB text/plain
ncbi.metadata.txt 271 Bytes text/plain
RdRp.alignment 23.74 KB text/plain

Purpose

The data were collected to investigate the cause of malignant melanoma in brown bullhead. These data may be used as evidence that a novel calicivirus was present in an individual fish with this condition.

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  • Eastern Ecological Science Center
  • USGS Data Release Products

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Type Scheme Key
DOI https://www.sciencebase.gov/vocab/category/item/identifier doi:10.5066/P9MPFVMX

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