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  4. Population genetic analysis of three aquatic macroinvertebrate species from samples in Grand Canyon (Arizona, USA) tributaries and nearby reference streams, 2016-2021

Population genetic analysis of three aquatic macroinvertebrate species from samples in Grand Canyon (Arizona, USA) tributaries and nearby reference streams, 2016-2021

Dates

Publication Date
Start Date
2016-10-01
End Date
2021-12-17

Citation

Abernethy, E.F., and Muehlbauer, J.D., 2022, Population genetic analysis of three aquatic macroinvertebrate species from samples in Grand Canyon (Arizona, USA) tributaries and nearby reference streams, 2016-2021: U.S. Geological Survey data release, https://doi.org/10.5066/P9U429YG.

Summary

This dataset contains single nucleotide polymorphism (SNP) information for aquatic insect species collected in tributaries of the Colorado River in Grand Canyon (Arizona, USA), as well as SNP information for individuals collected from reference reaches of the Upper Colorado River Basin in Utah. This dataset focuses specifically on three species that were common and widely distributed throughout tributary streams in Grand Canyon: a mayfly (Fallceon quilleri), a caddisfly (Hydrospyche oslari), and a water strider (Rhagovelia distincta).

Contacts

Point of Contact :
Jeffrey D Muehlbauer, Alaska Cooperative FIsh and Wildlife Research Unit
Originator :
Erin F Abernethy, Jeffrey D Muehlbauer
Metadata Contact :
Jeffrey D Muehlbauer, Alaska Cooperative Fish and Wildlife Research Unit
Publisher :
U.S. Geological Survey
Distributor :
U.S. Geological Survey - ScienceBase
SDC Data Owner :
Cooperative Research Units
USGS Mission Area :
Ecosystems

Attached Files

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metadata.xml
Original FGDC Metadata
View 		50.57 KB application/fgdc+xml
GeneticsMS_public_code.R 67.4 KB text/x-rsrc
FQsnps_100_5.vcf 1.21 MB text/x-vcard
HOsnps_100_5.vcf 2.8 MB text/x-vcard
RDsnps_100_5.vcf 5.7 MB text/x-vcard
trib_group_FQ_160.csv 1.45 KB text/csv
trib_group_HO_105.csv 991 Bytes text/csv
trib_group_RD_156.csv 1.43 KB text/csv
Geo_distances1.csv 187 Bytes text/csv
trib_lat_log.csv 563 Bytes text/csv

Purpose

Data are intended to be used for comparison of genetic single nucleotide polymorphisms (SNPs) for species. They were collected as part of a research project investigating population connectivity of aquatic macroinvertebrate species in Grand Canyon (Arizona, USA). Data may be useful for future SNP comparisons for these species in additional locations, or for other studies where aquatic macroinvertebrate SNP information is relevant.

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Communities

  • Cooperative Fish and Wildlife Research Units
  • USGS Data Release Products

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Additional Information

Identifiers

Type Scheme Key
DOI https://www.sciencebase.gov/vocab/category/item/identifier doi:10.5066/P9U429YG

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