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Natural and anthropogenic contaminants, pathogens, and viruses are found in soils and sediments throughout the United States. Enhanced dispersion and concentration of these environmental health stressors in coastal regions can result from sea level rise and storm-derived disturbances. The combination of existing environmental health stressors and those mobilized by natural or anthropogenic disasters could adversely impact the health and resilience of coastal communities and ecosystems. This dataset displays the exposure potential to environmental health stressors in the Edwin B. Forsythe National Wildlife Refuge (EBFNWR), which spans over Great Bay, Little Egg Harbor, and Barnegat Bay in New Jersey, USA. Exposure...
Categories: Data;
Types: ArcGIS REST Map Service,
ArcGIS Service Definition,
Citation,
Downloadable,
Map Service;
Tags: Atlantic Ocean,
Barnegat Bay,
Edwin B. Forsythe National Wildlife Refuge,
Great Bay,
Little Egg Island,
Physiological and molecular endpoints observed in juvenile largemouth bass in response to an estrogen (17α-ethinylestradiol) and subsequently a bacterial challenge (Edwardsiella piscicida) exposure under laboratory conditions. Also included are water quality and chemical concentration data.
The data include concentrations of current use pesticides in tissues of larval wood frog (Lithobates sylvaticus) and spotted salamander (Ambystoma maculatum) and the presence of ranavirus in wood frogs and spotted salamanders from three northeastern National Wildlife Refuges sampled in 2013 and 2014. The data also include estrogenicity, protein phosphatase 2A inhibition and a suite of 15 major and minor elements in sediment screened using portable X-Ray Fluorescence. The data include sediment and tissue samples collected from 16 wetlands at the Patuxent Research Refuge (PRR) in central Maryland, USA, 15 wetlands at the Assabet River and Oxbow National Wildlife Refuges (EMASS) in eastern Massachusetts, USA, and nine...
Natural and anthropogenic contaminants, pathogens, and viruses are found in soils and sediments throughout the United States. Enhanced dispersion and concentration of these environmental health stressors in coastal regions can result from sea level rise and storm-derived disturbances. The combination of existing environmental health stressors and those mobilized by natural or anthropogenic disasters could adversely impact the health and resilience of coastal communities and ecosystems. This dataset displays the exposure potential to environmental health stressors in the Edwin B. Forsythe National Wildlife Refuge (EBFNWR), which spans over Great Bay, Little Egg Harbor, and Barnegat Bay in New Jersey, USA. Exposure...
The data included here were gathered to determine the effects of cattle grazing on wetland water quality in the Klamath National Wildlife Refuge in Oregon. Surface water samples from sites representing a range of grazing histories were collected between June and October in 2017 and 2018. Samples were analyzed for nutrients (ammonia, nitrate plus nitrite, nitrite, and orthophosphate), total coliforms, E. coli, enterococci, and estrogenicity by U.S. Geological Survey laboratories. Basic water quality parameters such as temperature, pH, turbidity and specific conductance were also collected in the field during each site visit. Quality assurance samples (blanks and replicates) as well as method information is also included...
Categories: Data;
Tags: E. Coli,
Klamath National Wildlife Refuge,
USGS Science Data Catalog (SDC),
biota,
environment,
The data were gathered as part of a long-term, seasonal assessment of estrogenicity in selected locations within Pennsylvania from 2012-2017. Data were collected over this time frame to determine seasonal and annual changes in surface water estrogenicity.Estrogen is reported as estrogen equivalents (EEQ) as determined by a bioluminescent yeast estrogen screen. A total of 193 grab water samples were collected during this time of which 41% had EEQ above the limit of detection. The maximum estrogen equivalents (EEQ) measured was 5.44 ng EEQ/ L, while the median concentration was 0.44 ng/L. POCIS samplers were deployed at a number of sites to determine time-weighted estrogenicity between 2014 and 2017. A total of 150...
Categories: Data;
Tags: Environmental Health,
New Jersey,
USGS Science Data Catalog (SDC),
Water Quality,
Water Quality,
The data presented in this data release includes 11 field/water quality parameters, concentrations of 16 nutrients/anions, dissolved organic carbon, 14 organic contaminants, net estrogenicity concentrations, and 51 inorganic constituents in surface water collected twice from 28 stream sites and collected once from 2 stream sites in the Shenandoah Valley (Virginia and West Virginia, USA), in the summer of 2021 (Table_1_Sites and Table_2_Methods). The estrogenicity, inorganic, and organic chemical characteristics of river waters were analyzed using 19 separate analytical methods at 5 laboratories (Table_2_Methods). Surface water was analyzed for water quality and nutrients (Table_3_WQ_Nutrients_Anions_DOC), toxic...
In the spring of 2021, six households with private wells were selected throughout Graton, California, based on proximity to agriculture (within one mile of agriculture), well depth (i.e., less than 150 feet in depth), and well type (i.e., dug versus drilled). Silicone bands were deployed for 30 days at outdoor locations at each household to passively sample pesticides in ambient air. On May 3, 2021, the silicone bands were retrieved and outdoor water samples (i.e., spigot on the side of the house) and indoor tap water samples (i.e., kitchen faucet used for drinking water) were collected and analyzed for 187 pesticides, 57 potential hormonally active chemicals, and estrogenicity. This study was a citizen science...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Environmental Health,
USGS Science Data Catalog (SDC),
Water Quality,
Water Quality
Data were collected as part of an investigation developed by Leetown Science Center to investigate the comparative detection of avian influenza viruses from waterfowl and potential environmental reservoirs such as aquatic sediment from waterfowl habitat. This dataset identifies positive or negative test results for qRT-PCR (quantitative reverse transcriptase polymerase chain reaction) for avian influenza virus through identification of the Type A influenza virus matrix gene from aquatic sediment samples. Sediment samples were collected from waterfowl habitat so as to determine if temporal and spatial differences in virus detection by qRT-PCR were evident among test sites.
Categories: Data;
Tags: Delmarva Peninsula,
Dorchester County, Maryland,
USGS Science Data Catalog (SDC),
avian influenza,
molecular biology,
SARS-CoV-2 Data from National Wastewater Surveillance System Surge Capacity Sampling, September 2021
Wastewater-based epidemiology (WBE) is used to determine the consumption of, or exposure to, chemicals or pathogens in human populations, and is conducted by collecting representative samples of untreated wastewater (influent) to quantify pathogens shed in the population served by the sampled wastewater system. The Centers for Disease Control and Prevention (CDC) and the US Department of Health and Human Services (HHS), in collaboration with the United States Geological Survey (USGS) and other agencies throughout the federal government, initiated the National Wastewater Surveillance System (NWSS) in response to the COVID-19 pandemic to conduct WBE using analytical methods for the collection and analysis of SARS-CoV-2...
Coastal communities are uniquely vulnerable to sea-level rise and severe storms such as hurricanes. These events enhance the dispersion and concentration of natural and anthropogenic chemicals and pathogenic microorganisms that could adversely affect the health and resilience of coastal communities and ecosystems in subsequent years. The U.S. Geological Survey has developed the Sediment-Bound Contaminant Resiliency and Response (SCoRR) strategy to define baseline and post-event sediment-bound environmental health stressors. These data document the results from protein phosphatase 2A screening of extracts for selected stations in the northeastern U.S. during the 2015 pilot implementation of the SCoRR strategy in...
These data represent surface water and bed sediment samples analyzed for a variety of organic compounds. The samples were collected in streams and rivers in the Chesapeake Bay watershed from 2012-2018. Sites were located in Maryland, Pennsylvania, and West Virginia. Surface water samples were collected from 25 sites and analyzed for estrogenicity and an extensive suite of organic contaminants including hormones, pharmaceuticals, wastewater indicators, pesticides, phytoestrogens, and mycotoxins. Bed sediment samples were collected from 20 sites and analyzed for a suite of organic contaminants including hormones, wastewater indicators, pesticides, and organohalogens. Bed sediment was also analyzed for total organic...
Categories: Data Release - Revised;
Tags: Androgen,
Caffeine/Nicotine,
Chesapeake Bay,
Endocrine Disruption,
Estrogen,
We report a draft genome of a previously undescribed calicivirus from a single brown bullhead inhabiting Lake Memphremagog, Vermont/Quebec. The genome is 7413 nt in length and is most similar to the Atlantic salmon calicivirus (nucleotide identity; 64.7%).
The data is supplemental to the 2018 USGS Open File Report, "An evaluation of the acute and chronic toxicity of potassium chloride, active compound in the molluscicide potash, on salmonid fishes and their forage base". This research was performed as a Science Support Partnership (SSP) study with USFWS in order to evaluate potential lethal and sublethal impacts of potassium chloride on salmonid fishes and selected invertebrate forage. Files in this data set describe blood chemistry parameters, plasma osmolality and cortisol, gill chloride cell abundance, and fish total body weight and total length for specimens from each of the two salmonid species tested (brook trout, Salvelinus fontinalis, and Chinook salmon, Oncorhynchus...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Environmental Health,
Leetown Science Center,
USGS Science Data Catalog (SDC),
Wildlife Disease,
aquatic biology,
The files in this data release are the processed DNA consensus sequence alignment files for the chelonid herpesvirus 5 (ChHV-5) genome plus 66 open reading frames representing protien-coding genes. DNA was extracted from tumor biopsies from green sea turtles (Chelonias mydas) with fibropapillomatosis sampled from Florida and Hawaii coastal waters. We used high-throughput short-read sequencing (Illumina MiSeq and Ion Torrent Personal Genome Machine) of long-range PCR products amplified from tumor tissue using primers designed from the single available ChHV5 reference genome from a Hawaii green sea turtle. The raw sequence data is available at the NCBI Sequence Read Archive under bioproject number PRJNA360405, including...
This data set includes information pertaining to 300 bivalve mollusk tissue samples collected from mollusk specimens from waters in eastern Maryland on the Delmarva Peninsula. Data includes source location, species, morphometric data, and IAV matrix gene detection status for the bivalve samples collected and analyzed in the associated study.
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Chesapeake Bay,
Delmarva Peninsula,
Environmental Health,
USGS Science Data Catalog (SDC),
Wildlife Biology,
Natural and anthropogenic contaminants, pathogens, and viruses are found in soils and sediments throughout the United States. Enhanced dispersion and concentration of these environmental health stressors in coastal regions can result from sea level rise and storm-derived disturbances. The combination of existing environmental health stressors and those mobilized by natural or anthropogenic disasters could adversely impact the health and resilience of coastal communities and ecosystems. This dataset displays the exposure potential to environmental health stressors in the Edwin B. Forsythe National Wildlife Refuge (EBFNWR), which spans over Great Bay, Little Egg Harbor, and Barnegat Bay in New Jersey, USA. Exposure...
Categories: Data;
Types: ArcGIS REST Map Service,
ArcGIS Service Definition,
Citation,
Downloadable,
Map Service;
Tags: Atlantic Ocean,
Barnegat Bay,
Edwin B. Forsythe National Wildlife Refuge,
Great Bay,
Little Egg Island,
Disease outbreaks, skin lesions, fish kill events, and reproductive abnormalities have been observed in wild populations of bass in the Chesapeake Bay watershed. Occurrence of synthetic and natural hormones from wastewater treatment plants and livestock operations, pesticides from agricultural lands, and phytoestrogens from cover crops have been implicated as potential causes of these adverse effects. Late summer to fall is the period of early gonad recrudescence in adult bass when spermatogenesis and oogenesis begin for the upcoming spawning event in spring. Our objective was to assess whether early gonad recrudescence was a period of sensitivity for inducing immunomodulation. Adult largemouth bass (LMB; Micropterus...
Categories: Data;
Tags: Aquatic Biology,
Environmental Health,
Micropterus salmoides,
Missouri,
USGS Science Data Catalog (SDC),
Oklahoma State University South-Central Research Station (SCRS) was used to conduct research to understand the chemical composition of various water types and their potential environmental and human health effects. The study area provided the opportunity to study five water types: (1) receiving surface water (Washita River), (2) urban stormwater, (3) wastewater treatment plant effluent used for irrigation, (4) rain-induced runoff from an effluent-irrigated cornfield, and (5) rain-induced runoff from a dryland cornfield. Fifteen water samples were collected from August 2018 to October 2019. In addition, two composite above ground whole-corn plant samples (i.e., stem, leaves, grain) were collected from the effluent...
Samples were collected, processed, and analyzed for organics, estrogen equivalents, and fecal indicator bacteria. Filtered organic samples were sent to the National Water Quality Laboratory in Denver, Colorado. Unfiltered estrogen equivalent samples were sent to the Organic Geochemistry Research Lab in Lawrence, Kansas, for extraction, after which they were sent to the National Fish Health Research Laboratory in Leetown, West Virginia. Bacteria samples were processed at the Central-Midwest Water Science Center Iowa City, Iowa, office. Staff collected field parameters in-situ.
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