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  4. Metabarcoding data from freshwater mussel eDNA collected in Clinch River, Virginia 2017

Metabarcoding data from freshwater mussel eDNA collected in Clinch River, Virginia 2017

Dates

Publication Date
Start Date
2017-09-19
End Date
2018-10-31

Citation

Klymus, K.E., Richter, C.A., Thompson, N.L., Hinck, J.E., and Jones, J.W., 2020, Metabarcoding data from freshwater mussel eDNA collected in Clinch River, Virginia 2017: U.S. Geological Survey data release, https://doi.org/10.5066/P9GO0A2R.

Summary

Data from metabarcoding assays to detect a suite of mussel species using mitochondrial DNA regions of the cytochrome c oxidase subunit I (COI) and NADH dehydrogenase subunit (ND1) genes sequences.

Contacts

Point of Contact :
Katy E Klymus
Originator :
Katy E Klymus, Cathy A Richter, Nathan L Thompson, Jo E Hinck, Jess W Jones
Metadata Contact :
CERC Data Managers
Publisher :
U.S. Geological Survey
Distributor :
U.S. Geological Survey - ScienceBase
SDC Data Owner :
Columbia Environmental Research Center
USGS Mission Area :
Ecosystems

Attached Files

Click on title to download individual files attached to this item.

Clinch river eDNA metabarcoding 2017.xml
Original FGDC Metadata
View 		38.16 KB application/fgdc+xml
Illumina MiSeq sequence-COI metabarcoding primers.txt 5.62 KB text/plain
illumina MiSeq sequence-ND1 metabarcoding primers.txt 5.59 KB text/plain

Purpose

The data were collected to validate the use of eDNA metabarcoding assays for freshwater mussel monitoring.

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Communities

  • Columbia Environmental Research Center (CERC)
  • USGS Data Release Products

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Provenance

Additional Information

Identifiers

Type Scheme Key
DOI https://www.sciencebase.gov/vocab/category/item/identifier doi:10.5066/P9GO0A2R

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