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This data release includes physical and chemical characteristics of field collected sediment and soil samples in Missouri representing potential sediment/soil that may enter the water column during construction related activities. Three samples were collected, including Spring River sediment, Osage River bank soil and Columbia crushed limestone. The impacts of increased suspended solid level due to the three samples on early-stage freshwater mussels were examined using three freshwater mussel species, including Fatmucket (Lampsilis siliquoidea), Arkansas Brokenray (Lampsilis reeveiana), and Washboard (Megalonaias nervosa). Specifically, toxicity endpoints including survival, biomass, and growth of juveniles were...
Categories: Data;
Tags: Acute toxicity,
Aquatic Biology,
Boone County,
Chronic toxicity,
Osage River,
This data set includes geospatial data and tables providing location, environmental, and vegetation data collected in 2017 and 2018 at the Little Saint Francis River (LSFR) chat pile restoration site, Fredericktown, Madison County, Missouri. Restoration actions are being implemeneted as part of the settlement for the Madison County Mines Superfund site to compensate the public for losses of natural resources and the services they provide as part of the Natural Resource Damage Assessment and Restoration Southeast Missouri Lead Mining District case. Data were collected prior to and during the early stages of restoration actions to restore bottomland forest habitat, reduce invasive plant species abundance, and improve...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Fredericktown,
Little Saint Francis River,
Madison County,
Madison County Mines Superfund Site,
Missouri,
This data release contains bioassay data from sediment toxicity tests conducted by the USGS Columbia Environmental Research Center (CERC) with 66 sediment samples collected from in and around the Upper Columbia River in the fall of 2013. Toxicity testing was conducted from fall 2013 through summer 2014 with the amphipod, Hyalella azteca, the midge Chironomus dilutus, and the mussel Lampsilis siliquoidea. Short-term toxicity endpoints (10-28 d) included survival, weight, and biomass of all test organisms. Long-term tests with amphipods (42 d) and midges (about 50 d) included reproduction endpoint. These data are intended to be used to characterize concentration-response relationships between metals concentrations...
Categories: Data;
Types: Citation;
Tags: Columbia Environmental Research Center,
Sediment toxicity,
State of Washington,
Upper Columbia River,
Washington Water Science Center,
Interest in the field of environmental DNA (eDNA) is growing rapidly and eDNA surveys are becoming an important consideration for aquatic resource managers dealing with invasive species. However, in order for eDNA monitoring to mature as a research and management tool, there are several critical knowledge gaps that must be filled. One such gap is the fate of eDNA materials in the aquatic environment. Understanding the environmental factors that influence the decay of eDNA and how these factors impact detection probabilities over time and space could have significant implications for eDNA survey design and data interpretation. Here we experimentally explore eDNA decay in waste materials and reproductive cells obtained...
Categories: Data;
Types: Citation;
Tags: Aquatic Biology,
Ecology,
Environmental Health,
Genetics,
Missouri,
Semi-Permeable Membrane Devices (SPMDs) were deployed for approximately 2 weeks at Palmyra Atoll during October and November, 2008. SPMDs passively accumulate organic compounds from the aquatic enviroment, and are then analyzed for various organic compounds. The deployment date, reasons for selecting the particular site, and photograph numbers as links are indicated.
Categories: Data;
Types: Citation,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Pacific Ocean,
Palmyra Atoll,
U.S. Navy,
World War II,
contamination,
Data set contains depth and velocity grids centerpoints generated from hydrodynamic model (SRH-2D) simulations run for a range of discharges. Date range corresponds to month(s) that bathymetric survey was performed. Three study reaches were considered in this analysis: the Fairview reach of the Yellowstone River, MT, the Miami and Lisbon-Jameson reaches of the Lower Missouir River. Data and application are described in detail in accompanying journal article (Erwin et al., 2017).
Categories: Data;
Types: Citation;
Tags: Missouri River, Missouri, Missouri River Basin,
biota,
hydrology,
inlandWaters
Within large-river ecosystems, floodplains serve a variety of important ecological functions. A recent survey of 80 managers of floodplain conservation lands along the Upper and Middle Mississippi and Lower Missouri Rivers in the central United States found that the most critical information needed to improve floodplain management centered on metrics for characterizing depth, extent, frequency, duration, and timing of inundation. These metrics can be delivered to managers efficiently through cloud-based interactive maps. To calculate these metrics, we interpolated an existing one-dimensional HEC-RAS hydraulic model for the Middle Mississippi River, which simulated water surface elevations at cross sections spaced...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Upper Mississippi,
Upper Mississippi-Cape Girardeau,
Upper Mississippi-Meramec,
environment,
floodplains,
Diploid and triploid Grass Carp (Ctenopharyngodon Idella) tagged with acoustic transmitters were observed in Truman Reservoir, Missouri from February 2017 to March 2019 to determine habitat usage in winter. Habitat parameters were measured at used and available sites to model habitat preference. In addition, tagged fish were targeted during removal attempts to determine the efficacy of using tagged Judas Grass Carp in removing wild conspecifics. This dataset includes information on tagged Grass Carp and habitats they selected as well as capture events and characteristics of the wild fish caught during these attempts.
The health of soils along roadways is critical for maximizing habitat quality and minimizing negative ecological effects of roads. Adjacent to unpaved roads, soil chemistry may be altered by the deposition of dust, as well as by road treatment with dust suppressants or soil stabilizer products. If present in roadside soils, these product residues may be available to plants, terrestrial invertebrates, or small mammals. Unfortunately, very few studies have attempted to track the transport of dust suppressants after application. As part of a larger ongoing study on the environmental effects of dust suppressant products on roadside plants and animals, we sampled roadside soils at Loess Bluff National Wildlife Refuge...
Categories: Data;
Tags: Road ecology,
USGS Science Data Catalog (SDC),
Unpaved road,
dust,
dust suppressant
This data release includes sampling location identification and timing data as well as plant and insect pollinator taxonomic information in Conservation Reserve Program fields. Sampling took place during July and August of 2019. Fields were located on private land managed for the U.S.Department of Agriculture Conservation Reserve Program in eastern central Iowa, U.S.A.
Categories: Data;
Tags: Conservation Reserve Program,
Environmental Health,
Iowa,
Land Use Change,
USGS Science Data Catalog (SDC),
These two datasets contain metrics from hydrodynamic and particle tracking simulations for two sub-reaches of the Upper Missouri River near Wolf Point, MT. The upstream reach is referred to as the “upper” reach while the downstream reach is referred to as the “lower” reach. Simulations were performed for 16 flows in the range of 185-635 cms at increments of 30 cms.
Data were collected in June 2016 as part of a dye-trace experiment in the Missouri River downstream from Fort Peck Dam, Montana, USA. Fluorometers were deployed at 8 measurement stations over a 135-km study reach. Approximately 51 L of Rhodamine WT (RWT) dye was injected on 26 June 2016 at 14:30 MDT. The injection occured along a transect located approximately 3000 meters downstream from the confluence of the Milk and Missouri Rivers. Injection was performed via a gravity-feed system and was complete within seven minutes of initaition. RWT dye was diluted by at least half to facilitate mixing and was injected approximately 0.30 m below the water surface. Fluorometers were placed approximately 4 to 8 m from shore...
Shapefile created by USGS. Channel transects were constructed to be used in evaluating channel widths and channel width variation. Transects were laid out at 0.1 mile intervals along the navigation channel thalweg. They extend perpendicular to thalweg and intersect the bankfull channel margin, delineated from low-altitude aerial orthophotos provided by the US Army Corps of Engineers, 11/1/2012 to 11/21/2012. The bankfull dimensions were digitized by hand. Each transect was additionally attributed with the USGS bend number, Pallid Sturgeon Population Assessment Program (PSPAP) segment number, and PSPAP bend number.
Categories: Data;
Types: Citation,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Iowa,
Kansas,
Missouri,
Nebraska,
South Dakota,
Data set contains individual structures and use-areas identifiable from scanned images of 1944 hand-drawn map of buildings and facilities at Palmyra Atoll during World War II, at which time the atoll served as a training facility for the U.S. Navy. Scanned images were georeferenced against control points identifiable from 2007 QuickBird satellite imagery and on control points for which positional data were gathered during sampling in October and November 2008. Georeferenced image was then used to delineate individual structures and other areas as polygons. Attributes were taken from legend for 1944 map.
Categories: Data;
Types: Citation,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Pacific Ocean,
Palmyra Atoll,
U.S. Navy,
World War II,
contamination,
Data set contains depth and velocity grids centerpoints generated from hydrodynamic model (SRH-2D) simulations run for a range of discharges. Date range corresponds to month(s) that bathymetric survey was performed. Three study reaches were considered in this analysis: the Fairview reach of the Yellowstone River, MT, the Miami and Lisbon-Jameson reaches of the Lower Missouir River. Data and application are described in detail in accompanying journal article (Erwin et al., 2017).
Categories: Data;
Types: Citation;
Tags: Missouri River, Missouri, Missouri River Basin,
biota,
hydrology,
inlandWaters
The vernal pool fairy shrimp, Branchinecta lynchi, (Branchiopoda; Anostraca) and other fairy shrimp species have been listed as ‘threatened’ or ‘endangered’ under the United States’ Endangered Species Act (ESA). There is little information about the sensitivity of Branchinecta spp. to toxic effects of contaminants, making it difficult to determine whether they are adequately protected by water quality criteria. A series of acute (24 hr) lethality/immobilization tests were conducted with three species of fairy shrimp (Branchinecta lynchi, Branchinecta lindahli, and Thamnocephalus platyurus) and 10 chemicals with varying modes of toxic action: ammonia, potassium, chloride, sulfate, chromium(VI), copper, nickel, zinc,...
Categories: Data;
Types: Citation;
Tags: NA,
USGS Science Data Catalog (SDC),
acute toxicity,
vernal pool fairy shrimp,
water-only toxicity
Globally, changing fire regimes due to climate is one of the greatest threats to ecosystems and society. This dataset presents projections of historic and future fire probability for the southcentral U.S. using downscaled climate projections and the Physical Chemistry Fire Frequency Model (PC2FM, Guyette et al., 2012). Climate data from 1900-1929 and projected climate data for 2040-2069 and 2070-2099 were used as model inputs to the Physical Chemistry Fire Frequency Model (Guyette et al. 2012) to estimate fire probability. Baseline and future time period data are from three global climate models (GCMs): CGCM, GFDL, and HadCM3. The nine associated data sets (tiffs) represent estimated change in mean fire probability...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: New Mexico,
Oklahoma,
Texas,
climate change,
mean fire interval,
Survival and growth of four species of juvenile mussels in a pulsed flow-through auto-feeding beaker system.
Categories: Data;
Tags: Columbia Environmental Research Center,
Freshwater mussels,
Growth,
Survival,
USGS Science Data Catalog (SDC),
Data describe designed environmental DNA (eDNA) experiments for the estimation of eDNA shedding rates for the spectaclecase (Cumberlandia monodonta), mucket (Actinonaias ligamentina), and fatmucket (Lampsilis siliquoidea) from water samples collected in the laboratory under differing laboratory conditions. Shedding rates were tested under variable mussel biomass, diet, and temperature. Parameters described include descriptions of laboratory collected water samples that were tested to estimate concentration of spectaclecase, mucket or fatmucket DNA qPCR results, and associated quality assurance measurements.
Categories: Data;
Tags: Columbia Environmental Research Center,
climatologyMeteorologyAtmosphere,
eDNA,
eDNA Shedding rates,
environmental DNA,
We investigated whether the length of time fire chemical weathers on a terrestrial substrate before mixing into aquatic environments alters the chemical’s toxicity when encountered by juvenile rainbow trout. We also looked at whether the type of substrate where the chemical is applied affects its toxicity to juvenile rainbow trout after mixing into water. Two fire chemicals (Phos Chek LC95A-R and Phos Chek MVP-Fx) were applied to four substrate media (low organic content soil, high organic content soil, duff, and gravel) and allowed to age on the substrate for 7, 14, 28 or 56 days. At the end of the assigned weathering period, 96-hour assays were conducted by adding water to the dosed substrate and stocking each...
Categories: Data;
Tags: Aquatic Biology,
Boone County, Missouri,
Columbia Environmental Research Center,
Environmental Health,
Fire suppression,
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