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Gulf Watch Alaska Nearshore Component: Sea Otter Aerial Survey Data Katmai National Park and Preserve, 2008-2018 These data are part of the Gulf Watch Alaska (GWA) long term monitoring program, nearshore monitoring component. Specifically, these data describe sea otter (Enhydra lutris) aerial survey observations from the waters around Katmai National Park and Preserve from surveys conducted in 2008, 2012, 2015, and 2018. Sea otters are a keystone predator, well known for structuring the nearshore marine ecosystem through their consumption of invertebrate prey. The dataset consists of 3 comma-delimited files (CSV) exported from Microsoft Excel. The data consists of (1) Strip transect counts, (2) Intensive Search Unit (ISU) counts, and (3) Transect coordinates. For each aerial survey, a pilot flew an airplane at an altitude... Categories: Data, Data Release - Revised; Tags: Abundance, Aerial survey, Alaska, Animals/Vertebrates, Aquatic Biology, All tags... Aquatic ecosystems, Benthic habitat, Biota, Coastal habitat, Distribution, Ecology, Ecology, Ecosystem monitoring, Enhydra lutris, Environment, Gulf of Alaska, Intertidal environments, Katmai National Park and Preserve, Marine environment monitoring, Marine mammals, Otters, Population dynamics, Sea otters, USGS Science Data Catalog (SDC), Wildlife Biology, Fewer tags Harlequin Duck Genetic Data, North America, Greenland, and Iceland, 1945-2006 This data package is comprised of three tables with data from wintering Harlequin Ducks (Histrionicus histrionicus) from Alaska, British Columbia, Washington, Maine, Greenland, and Iceland. The first table contains available allele sizes for 7 microsatellite loci (Sfiµ1, Sfiµ4, Sfiµ9, Sfiµ10, Bcaµ10, Hhiµ2, Hhiµ5) and mtDNA control region haplotypes. The second table contains the mtDNA control region sequences used to assign haplotypes. The third table provides the geographic locations of sampling sites. Categories: Data; Tags: Alaska, Alleles, Animals/Vertebrates, Biota, Birds, All tags... British Columbia, Canada, Coastal ecosystems, DNA Primers, DNA sequencing, DNA, Mitochondrial, Ducks/Geese/Swans, Environment, Gene Flow, Genetic diversity, Genetic markers, Genetics, Genetics, Genotype, Greenland, Harlequin Duck, Histrionicus histrionicus, Iceland, Magadan, Maine, Marine ecosystems, Microsatellite Repeats, Migratory birds, Overwintering, Polymerase chain reaction, Population Genetics, Russia, USGS Science Data Catalog (SDC), Washington, Waterfowl, Wetland ecosystems, Wildlife, Wildlife Biology, Fewer tags Data Associated with a Multi-Stage Captive Trial Assessing the Effects of Saxitoxin Ingestion by Common Murres (Uria aalge) This data set is comprised of results associated with a multi-stage experimental study to determine the effects of paralytic shellfish toxin ingestion by Common Murres (Uria aalge) conducted in 2021-2022. Data is comprised of eight spreadsheets covering each phase of the study including specific bird dosing data, behavioral observation data, foraging trial data, and tissue testing results for Saxitoxin (STX) and related congeners. Categories: Data; Tags: Acute toxicity, Alaska, Animals/Vertebrates, Aquatic Biology, Behavior, All tags... Bioaccumulation, Biological Science Disciplines, Biota, Biotoxin, Birds, Disease, Dose-response effects, Ecology, Ecotoxicology, Effective Dose, Environment, Environmental Health, Harmful algal bloom, Health, Laboratory experiments, Marine ecosystems, Natural Science Disciplines, Neurotoxin, Paralytic shellfish toxin, Pathologic Processes, Real-time monitoring and reporting, Saxitoxin, Seward, Tracer study, USGS Science Data Catalog (SDC), Waders/Gulls/Auks and allies, Wildlife Biology, Wildlife Disease, Fewer tags Gulf Watch Alaska, Nearshore Monitoring Component: Sea Otter Foraging Observations from Prince William Sound, Katmai National Park and Preserve, and Kenai Fjords National Park, 2012-2016 This data is part of the Gulf Watch Alaska (GWA) long term monitoring program, benthic monitoring component and a seasonal diet study in Kenai Fjords National Park. The dataset is a comma separated file exported from a Microsoft Access database. The data consists of observations made of foraging sea otters (Enhydra lutris). Observers used Questar field model spotting scopes and binoculars to identify prey. Date, local time, dive duration, success, prey type, prey size, prey number, handling time and surface time are all recorded. Sites are in Alaska and include locations in Katmai National Park and Preserve, Kenai Fjords National Park and Prince William Sound. This data in this file were collected 2012-2016. Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: Aquatic Biology, Ecology, Enhydra lutris, Gulf of Alaska, Katmai National Park and Preserve, All tags... Kenai Fjords National Park, Prince William Sound, USGS Science Data Catalog (SDC), Wildlife Biology, biota, coastal ecosystems, environment, foraging behavior, marine ecology, monitoring, prey, sea otters, synecology, Fewer tags Data for Infectivity of Wild-Bird Origin Influenza A Viruses in Minnesota Wetlands Across Seasons This data set represents an ecological and laboratory-based experiment to understand influenza virus viability in surface water. Data tables included in this release consist of 1) daily mean water temperature, 2) viability of viruses maintained in water, 3) influenza detection in duck samples, 4) viral titers of experimentally inoculated water samples, and 5) water chemistry. Categories: Data; Tags: Agassiz National Wildlife Refuge, Animal disease, Animal diseases/disorders/pests, Animals/vertebrates, Aquatic Biology, All tags... Avian influenza, Biota, Birds, Disease reservoirs, Disease/epidemic, Ducks/geese/swans, Environment, Environmental Health, Freshwater ecosystems, Genetics, Health, Health and disease, Influenza A virus, Lakes/reservoirs, Migratory birds, Minnesota, Persistence, Roseau River Wildlife Management Area, USGS Science Data Catalog (SDC), Virus Diseases, Viruses, Waterfowl, Wildlife, Wildlife Biology, Wildlife Disease, Wildlife disease, Fewer tags Black Oystercatcher Morphology and Primary Feather Lengths in Alaska and British Columbia, 2019-2022 These data provide morphological measurements and primary feather length measurements of Black Oystercatcher (Haematopus bachmani) captured at several sites across Alaska and British Columbia between 2019 and 2022. The first table contains mass and morphological measurements of body and bill size. The second table provides lengths of individual primary feathers measured from folded wing photographs using a computer software. These feather lengths are to be used in a size-constrained components analysis to calculate wing shape such as pointedness and convexity. Categories: Data; Tags: Age structure, Alaska, Animal morphology, Animals/Vertebrates, Avian physiology, All tags... Biota, Birds, Body size, Body weight, British Columbia, Canada, Capturing (animals), Coastal ecosystems, Ecology, Ecology, Environment, Gulf Islands, Haida Gwaii, Kachemak Bay, Katmai National Park and Preserve, Kenai Fjords National Park, Marine biology, Marine ecosystems, Migratory birds, Nearshore marine ecosystem, Pacific Rim National Park, Prince William Sound, Salish Sea, Sandpipers, Scientific interpretation, Sexual dimorphism, USGS Science Data Catalog (SDC), Wildlife Biology, Wing shape, Fewer tags Nesting Period Data for Black Brant (Branta bernicla nigricans) in Alaska This data package contains one table with nest initiation and end dates and clutch sizes from Black Brant (Branta bernicla nigricans) at two breeding colonies in Alaska. Data include nesting period determined by either nest visits or light-level data recorded by geolocators attached tarsal bands. Categories: Data; Tags: Alaska, Animals/Vertebrates, Annual cycle, Biota, Birds, All tags... Black brant, Branta bernicla nigricans, Coastal ecosystems, Ducks/Geese/Swans, Environment, Light-level geolocator, Migratory birds, Migratory rates/routes, Migratory species, NPR-A, National Petroleum Reserve-Alaska, Seasonal distribution, Species life history, Tagging devices, Telemetry, Tracking equipment, Tundra ecosystems, USGS Science Data Catalog (SDC), Waterfowl, Wildlife, Wildlife Biology, Yukon Delta, Yukon Delta National Wildlife Refuge, Yukon-Kuskokwim River Delta, Fewer tags Gulf Watch Alaska, Benthic Monitoring Component: Sea Otter Aerial Survey Data Kenai Fjords National Park, 2002-2016 These data are is part of the Gulf Watch Alaska (GWA) long term monitoring program, nearshore monitoring component. Specifically, these data describe sea otter (Enhydra lutris) aerial survey observations from the waters around Kenai Fjords National Park between 2002 and 2016. Sea otters are a keystone predator, well known for structuring the nearshore marine ecosystem through their consumption of invertebrate prey. The dataset consists of 3 comma delimited files exported from Microsoft Excel. The data consists of 1. Strip transect counts, 2. Intensive Search Unit (ISU) counts, and 3. Transect coordinates. For each aerial survey, a pilot flew an airplane at an altitude of 91m over pre-determined transects while an... Categories: Data; Tags: Abundance, Aerial survey, Alaska, Animals/Vertebrates, Aquatic Biology, All tags... Aquatic ecosystems, Benthic habitat, Biota, Coastal habitat, Distribution, Ecology, Ecology, Ecosystem monitoring, Enhydra lutris, Environment, Gulf of Alaska, Intertidal environments, Kenai Fjords National Park, Marine environment monitoring, Marine mammals, Otters, Population dynamics, Sea otters, USGS Science Data Catalog (SDC), Wildlife Biology, Fewer tags Detection of the Aquatic Invasive Species (AIS) Elodea canadensis and E. nuttallii Using Environmental DNA (eDNA), Alaska This data set is comprised of one table with sampling information and National Center for Biotechnology Information (NCBI) BioProject accession numbers for sequence information of this amplicon-based study targeting Elodea canadensis and E. nuttallii in freshwater systems of Alaska from environmental samples. Highly conserved primers which can differentiate these species of interest were developed for four portions of Elodea mtDNA genes (ITS1-5.8S, atpB-rbcL, and two variations of trnL-trnF). The reference sequences and conserved primer sets to identify species present were developed using publicly available data from NCBI GenBank (https://www.ncbi.nlm.nih.gov/genbank/). Categories: Data; Tags: 5.8S, Alaska, Aquatic Biology, Aquatic ecosystems, Aquatic ecosystems, All tags... Aquatic invasive species, Biota, Coastal ecosystems, DNA Primers, DNA sequencing, Ecology, Elodea, Environment, Environmental DNA, Environmental Health, Genetic markers, Genetics, Marine environment monitoring, Metabarcoding, Mitochondrial DNA, Polymerase chain reaction, Tundra ecosystems, USGS Science Data Catalog (SDC), Weeds, noxious plants, or invasive plants, Wetland ecosystems, Wildlife, atpB-rbcL, eDNA, trnL-trnF, Fewer tags Dictionary of Microsatellite Loci from the U.S. Geological Survey, Alaska Science Center, Molecular Ecology Laboratory This data package provides a dictionary of microsatellite locus primers used by the USGS Alaska Science Center, Molecular Ecology Laboratory (MEL). It is a look-up file of microsatellite locus names and citations to the original publication or source where additional information about the locus primers may be found. Categories: Data; Tags: Alleles, Animals/Vertebrates, Biota, Birds, Data Analysis and Visualization, All tags... Environment, Genetic Screening, Genetic Variation, Genetic diversity, Genetic markers, Genetics, Genetics, Genetics, Genetics, Population, Laboratory methods, Microsatellite Repeats, Polymerase chain reaction, Polymorphism, Genetic, Reference and Information Services, USGS Science Data Catalog (SDC), Wildlife Biology, Fewer tags Sea Otter Gene Transcription Data from Kodiak, the Alaska Peninsula, and Prince William Sound, Alaska, 2005-2012 This data set includes capture location, date, sex, and results of molecular gene transcription analysis for sea otters (Enhydra lutris) sampled in western Prince William Sound (WPWS), Alaska and comparison samples collected from Kodiak and the Alaska Peninsula, and reference samples collected from captive animals. Samples were collected between 2005 and 2012. Molecular gene transcription is the process by which information from the DNA template of a particular gene is transcribed into messenger RNA (mRNA) and eventually translated into a functional protein. The amount of mRNA transcribed from a particular gene is physiologically dictated. Altered levels of gene transcripts provide observable signs of health impairment. Categories: Data; Tags: Adak Island, Alaska, Alaska Peninsula, Animals/Vertebrates, Aquatic Biology, All tags... Biomarker, Biota, EVOS, Ecology, Ecosystem monitoring, Ecotoxicology, Environment, Environmental Health, Exxon Valdez Oil Spill, Gene transcription, Katmai National Park and Preserve, Knight Island, Kodiak Island, Mammals, Marine ecosystems, Montague Island, Oil exposure, Otters, Population recovery, Prince William Sound, USGS Science Data Catalog (SDC), Water Quality, Wildlife, Wildlife Biology, Fewer tags Harlequin Duck Capture and EROD Activity Data from Prince William Sound, Alaska, 2011, 2013, 2014 This data set includes capture information and ethoxyresorufin­O­deethylase (EROD) activity results for harlequin ducks sampled during March 2011, 2013, and 2014 in western Prince William Sound, Alaska. Categories: Data; Tags: Alaska, Animals/Vertebrates, Aquatic Biology, Aquatic ecosystems, Benthic habitat, All tags... Biomarkers, Biota, Birds, Capture, Coastal habitat, Cytochrome p4501A, Ecology, Ecology, Ecology, Ecosystem monitoring, Environment, Environmental Health, Exxon Valdez Oil Spill, Harlequin duck, Histrionicus histrionicus, Intertidal environments, Marine environment monitoring, Oil exposure, Population recovery, Prince William Sound, USGS Science Data Catalog (SDC), Water Quality, Wildlife Biology, Fewer tags USGS Alaska Science Center Adult Shorebird Morphological Measurement Data This dataset consists of three tables, 1) taxonomy, 2) contributors, and 3) shorebird morphological measurements collected from various species captured from 1977-2021. In addition, photographs of plumage patterns are available for several species. Researchers with the U.S. Geological Survey - Alaska Science Center, along with collaborators from many government agencies and research institutions, have studied shorebirds at numerous sites across North America, the Pacific Ocean, Australia, and New Zealand. This release includes over 10,000 observations relating to 35 shorebird species. Version History: First release: July 2023 Revised: October 2023 (ver. 2.0) Categories: Data; Tags: Age estimation methods, Alaska, Alaska Peninsula, Angyoyaravak Bay, Animal morphology, All tags... Animal tracking, Animals/Vertebrates, Arctic Coastal Plain, Argos, Australia, Avian physiology, Biota, Birds, Body size, Broome, Canada, Capturing (animals), Colville River Delta, Ecology, Environment, GPS, Golden Bay, James Bay, Migratory birds, Mingan Archipelago, Naval Air Station Palmyra, Nevada, New Zealand, North Slope, Oregon, PTT, Plovers, Plumage, Pribilof Islands, Pūkorokoro, Radio transmitter, Saint George Island, Saint Matthew Island, Saint Paul Island, Sandpipers, Satellite transmitter, Seward Peninsula, Shorebirds, USGS Science Data Catalog (SDC), VHS, Waders/Gulls/Auks and Allies, Wildlife, Wildlife Biology, Yellowknife, Yukon-Kuskokwim River Delta, Fewer tags Alaska Landbird Monitoring Survey Dataset Boreal Partners in Flight developed the Alaska Landbird Monitoring Survey (ALMS) primarily to monitor breeding populations of landbirds in the vast off-road areas of Alaska in conjunction with data collected from the roadside North American Breeding Bird Survey (BBS). ALMS is a collaborative program in which agencies and other entities conduct standardized surveys of breeding birds and their habitats on the lands they manage and then provide the data to the U.S. Geological Survey Alaska Science Center for analysis and archiving. The ALMS monitoring program comprises a set of survey blocks that have been selected in a stratified-random design primarily across state and Federal natural resource lands in Alaska with... Categories: Data; Tags: Admiralty Island, Alaska, Alaska Maritime National Wildlife Refuge, Alaska Peninsula, Alaska Peninsula National Wildlife Refuge, All tags... Andreafsky Wilderness, Animal and plant census, Animals/vertebrates, Arctic National Wildlife Refuge, Biodiversity, Biogeography, Biota, Bird behavior, Birds, Chugach National Forest, Chugach State Park, Copper River Census Area, Copper River Delta Fish and Wildlife Management Area, Cranes and allies, Denali National Park and Preserve, Denali State Park, Detection distance, Ducks/geese/swans, Eagle/falcons/hawks and allies, East Fork Skagway River, Ecology, Ecology, Environment, Environmental conditions, Fairbanks North Star Borough, Field inventory and monitoring, Fort Greely, Grebes, Habitats, Herons/egrets and allies, Innoko National Wildlife Refuge, James Dalton Mountain, Joint Base Elmendorf-Richardson, Kanuti National Wildlife Refuge, Kenai Wilderness, Klondike Gold Rush National Historic Park, Kodiak National Wildlife Refuge, Koyukuk National Wildlife Refuge, Koyukuk River, Loons, Migratory birds, Mitkof Island, Mount Fairplay, National Petroleum Reserve in Alaska, Natlaratlen River, North Slope Borough, Nowitna National Wildlife Refuge, Ornithology, Perching Birds, Resident birds, Sandpipers, Selawik National Wildlife Refuge, South Baranof Wilderness, Spatial distribution, Taku Glacier, Terrestrial ecosystems, Tetlin National Wildlife Refuge, Tongass National Forest, Tracy Arm-Fords Terror Wilderness, USGS Science Data Catalog (SDC), Waders/gulls/auks and allies, Wildlife, Wildlife Biology, Fewer tags Corrected Fire Perimeters of Alaska's National Wildlife Refuges This data package includes 481 geospatial vector polygons of historic fire perimeters associated with National Wildlife Refuges in Alaska. These polygons, originally held within the Alaska Large Fire Database (ALFD), were reviewed and found to have geospatial inaccuracies with respect to the fire they represent. They were corrected and updated based on a variety of remote sensing resources; the Monitoring Trends in Burn Severity (MTBS) database (https://www.mtbs.gov/viewer/index.html), geospatial rasters of historic fire activity derived from Landsat 1-9 imagery in the Google Earth Engine(https://earthengine.google.com) environment, and historical air photos acquired through EarthExplorer (https://earthexplorer.usgs.gov/).... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Alaska, Alaska Peninsula National Wildlife Refuge, Arctic National Wildlife Refuge, Becharof National Wildlife Refuge, Disturbance, All tags... Environment, Fires, Forestry, Habitat alteration and disturbance, Innoko National Wildlife Refuge, Izembeck National Wildlife Refuge, Kanuti National Wildlife Refuge, Kenai National Wildlife Refuge, Kodiak National Wildlife Refuge, Koyukuk National Wildlife Refuge, Land Use / Land Cover, Land Use Change, Landsat, Landscape, Landscape Processes, Nowitna National Wildlife Refuge, Remote Sensing, Remote sensing, Selawik National Wildlife Refuge, Tetlin National Wildlife Refuge, Togiak National Wildlife Refuge, USGS Science Data Catalog (SDC), Wildland fire, Yukon Delta National Wildlife Refuge, Yukon Flats National Wildlife Refuge, Fewer tags